RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 RAB23Q9ULC3 237 aa17.3■□□□□ 0.36
TRAF3-203ENST00000392745 NDRG2Q9UN36 371 aaKnown RBP17.3■□□□□ 0.36
TRAF3-203ENST00000392745 TRBV4-1A0A0J9YWV2 114 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 A0A1W2PQL4 384 aaPredicted RBP17.29■□□□□ 0.36
TRAF3-203ENST00000392745 TRBC2A0A5B9 178 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 FEZF1A0PJY2 475 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 FABP12A6NFH5 140 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 TPST2O60704 377 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 TMCC2O75069 709 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 CDK6Q00534 326 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 MC1RQ01726 317 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 EEF1A2Q05639 463 aaKnown RBP17.29■□□□□ 0.36
TRAF3-203ENST00000392745 HNRNPA0Q13151 305 aaKnown RBP17.29■□□□□ 0.36
TRAF3-203ENST00000392745 EFR3AQ14156 821 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 CCDC85BQ15834 202 aaPredicted RBP17.29■□□□□ 0.36
TRAF3-203ENST00000392745 ZNF770Q6IQ21 691 aaPredicted RBP17.29■□□□□ 0.36
TRAF3-203ENST00000392745 GDPGP1Q6ZNW5 385 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 TAGAPQ8N103 731 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 KRT78Q8N1N4 520 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 OR52N2Q8NGI0 321 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 HMGB4Q8WW32 186 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 TRIM63Q969Q1 353 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 UBE2E3Q969T4 207 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 TMEM80Q96HE8 168 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 SORBS1Q9BX66 1292 aaKnown RBP17.29■□□□□ 0.36
TRAF3-203ENST00000392745 WASH6PQ9NQA3 447 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 NDUFB11Q9NX14 153 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 ENPP4Q9Y6X5 453 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 PLA2G10O15496 165 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 KCNJ13O60928 360 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 EML2O95834 649 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 ALPPP05187 535 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 P2RX3P56373 397 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 SAXO2Q658L1 398 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 Q6ZS52 159 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 RD3Q7Z3Z2 195 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 GLCCI1Q86VQ1 547 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 TRIM69Q86WT6 500 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 GALNT6Q8NCL4 622 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 KLHL6Q8WZ60 621 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 TMEM203Q969S6 136 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 SLC25A46Q96AG3 418 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 SSR3Q9UNL2 185 aa17.29■□□□□ 0.36
TRAF3-203ENST00000392745 FFAR1O14842 300 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 KLK1P06870 262 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 HOXC4P09017 264 aaPredicted RBP17.28■□□□□ 0.36
TRAF3-203ENST00000392745 MSL3P1P0C860 447 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 AK4P27144 223 aaPredicted RBP17.28■□□□□ 0.36
TRAF3-203ENST00000392745 GPC1P35052 558 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 RAB28P51157 221 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 ZNF763Q0D2J5 394 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 RPE65Q16518 533 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 DUSP7Q16829 419 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 SLC5A12Q1EHB4 618 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.28■□□□□ 0.36
TRAF3-203ENST00000392745 CEP78Q5JTW2 689 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 PDZK1Q5T2W1 519 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 XKRXQ6PP77 449 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 PHC2Q8IXK0 858 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 OR52E1Q8NGJ3 308 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 CCL4L1Q8NHW4 92 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 CREB3L4Q8TEY5 395 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 TSACCQ96A04 125 aaPredicted RBP17.28■□□□□ 0.36
TRAF3-203ENST00000392745 CITED4Q96RK1 184 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 PCBD2Q9H0N5 130 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 PELI2Q9HAT8 420 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 GIMAP4Q9NUV9 329 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 PLEKHB1Q9UF11 243 aaPredicted RBP17.28■□□□□ 0.36
TRAF3-203ENST00000392745 TBC1D29Q9UFV1 150 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 DSPPQ9NZW4 1301 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 IGKV1-8A0A0C4DH67 115 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 GLULP15104 373 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 MLLT3P42568 568 aaPredicted RBP17.28■□□□□ 0.36
TRAF3-203ENST00000392745 LIM2P55344 173 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 KIAA1024LP59773 190 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 SMAD4Q13485 552 aaKnown RBP17.28■□□□□ 0.36
TRAF3-203ENST00000392745 NFATC4Q14934 902 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 CRB2Q5IJ48 1285 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 FAM20CQ8IXL6 584 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 NANOGP1Q8N7R0 232 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 YIPF7Q8N8F6 280 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 OR9Q1Q8NGQ5 310 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 OR2A1Q8NGT9 310 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 OR2M4Q96R27 311 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 AIF1LQ9BQI0 150 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 MND1Q9BWT6 205 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 RHBGQ9H310 441 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 TXNL4BQ9NX01 149 aaKnown RBP17.28■□□□□ 0.36
TRAF3-203ENST00000392745 REV1Q9UBZ9 1251 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 ENOPH1Q9UHY7 261 aa17.28■□□□□ 0.36
TRAF3-203ENST00000392745 ARHGEF17Q96PE2 2063 aaPredicted RBP17.27■□□□□ 0.36
TRAF3-203ENST00000392745 LRRTM2O43300 516 aa17.27■□□□□ 0.36
TRAF3-203ENST00000392745 RHCEP18577 417 aa17.27■□□□□ 0.36
TRAF3-203ENST00000392745 HNRNPA2B1P22626 353 aaKnown RBP17.27■□□□□ 0.36
TRAF3-203ENST00000392745 CCR8P51685 355 aa17.27■□□□□ 0.36
TRAF3-203ENST00000392745 ZNF91Q05481 1191 aa17.27■□□□□ 0.36
TRAF3-203ENST00000392745 KRT33BQ14525 404 aa17.27■□□□□ 0.36
TRAF3-203ENST00000392745 MPEG1Q2M385 716 aa17.27■□□□□ 0.36
TRAF3-203ENST00000392745 PYDC2Q56P42 97 aa17.27■□□□□ 0.36
TRAF3-203ENST00000392745 C22orf42Q6IC83 251 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms