RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CBX7O95931 251 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 IFNA16P05015 189 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF883P0CG24 379 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 PRKACGP22612 351 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 SSTR4P31391 388 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 PGDP52209 483 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 CRISP3P54108 245 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 ARSFP54793 590 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 IGLV3-21P80748 117 aaPredicted RBP11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 ACY1Q03154 408 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 FOXD4Q12950 439 aaPredicted RBP11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 CCNJQ5T5M9 372 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 SLC30A8Q8IWU4 369 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 GALNT12Q8IXK2 581 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 VWA5B2Q8N398 1253 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 GPR32P1Q8NGA4 272 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 OR52R1Q8NGF1 315 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF675Q8TD23 568 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 ADAMTS18Q8TE60 1221 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 RIT1Q92963 219 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 TSLPQ969D9 159 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 ZG16BQ96DA0 208 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 MVB12AQ96EY5 273 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 WFDC6Q9BQY6 131 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 C9orf16Q9BUW7 83 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 THUMPD1Q9NXG2 353 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 PTTG2Q9NZH5 202 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 CUL9Q8IWT3 2517 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 A0A087WV62 115 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 A8MUA0 341 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 FCMRO60667 390 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 E2F6O75461 281 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 BMP10O95393 424 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 ZIC2O95409 532 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 RECKO95980 971 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 IFNA14P01570 189 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 CD247P20963 164 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 S1PR1P21453 382 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 ANXA11P50995 505 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 PDX1P52945 283 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 HSD17B7P56937 341 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 MYBPC1Q00872 1141 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 CHRNEQ04844 493 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 DSG2Q14126 1118 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF267Q14586 743 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 IFI44LQ53G44 452 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 MLIPQ5VWP3 458 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 LAIR1Q6GTX8 287 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 OR2T5Q6IEZ7 315 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 CDC73Q6P1J9 531 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 SHISA6Q6ZSJ9 500 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 C16orf62Q7Z3J2 963 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 STK32CQ86UX6 486 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 LAPTM4BQ86VI4 370 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 COMTD1Q86VU5 262 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 ARMC8Q8IUR7 673 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 OR2T29Q8NH02 315 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 MAGEE2Q8TD90 523 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 PIK3R3Q92569 461 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF597Q96LX8 424 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 DGAT2Q96PD7 388 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 BARD1Q99728 777 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 CLK4Q9HAZ1 481 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 SIDT1Q9NXL6 827 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 CTSFQ9UBX1 484 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 CNOT11Q9UKZ1 510 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 RARRES3Q9UL19 164 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 CDC14AQ9UNH5 594 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 A8MVJ9 347 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 G3V2T6 193 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 J3KTA2 159 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 DLGAP1O14490 977 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 SCRG1O75711 98 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 RASAL1O95294 804 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 FUT4P22083 530 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 SPEM2Q0P670 501 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 PUM1Q14671 1186 aaKnown RBP eCLIP11.37□□□□□ -0.595e-6■□□□□ 10.2
SPTBN1-203ENST00000389980 C1QTNF12Q5T7M4 302 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 POP5Q969H6 163 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 DGCR14Q96DF8 476 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF607Q96SK3 696 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 CNPPD1Q9BV87 410 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 SLC38A1Q9H2H9 487 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 SMURF2Q9HAU4 748 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 TIMMDC1Q9NPL8 285 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 PNO1Q9NRX1 252 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 SLC22A11Q9NSA0 550 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 GIN1Q9NXP7 522 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 NDUFAF4Q9P032 175 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 SEC14L3Q9UDX4 400 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF639Q9UID6 485 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 BAG5Q9UL15 447 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 MKLN1Q9UL63 735 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 DTX4Q9Y2E6 619 aa11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 GPC6Q9Y625 555 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-203ENST00000389980 NUP210LQ5VU65 1888 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 BLACEA4D250 179 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 EFCAB7A8K855 629 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 FLRT2O43155 660 aa11.36□□□□□ -0.59
SPTBN1-203ENST00000389980 ASNA1O43681 348 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms