RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 FAM129CQ86XR2 697 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 OR6T1Q8NGN1 323 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 SLC9A6Q92581 669 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 TRPC4Q9UBN4 977 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 LRRK1Q38SD2 2015 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 SCO2O43819 266 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 RAB36O95755 333 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 KELP23276 732 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 MLLT1Q03111 559 aaPredicted RBP15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 P2RY14Q15391 338 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 GPAT3Q53EU6 434 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 CLEC12AQ5QGZ9 265 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 GDPGP1Q6ZNW5 385 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 KIF18BQ86Y91 864 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 SMPDL3AQ92484 453 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 DHRS1Q96LJ7 313 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 GDF15Q99988 308 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 NFKBIL1Q9UBC1 381 aaPredicted RBP15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 TESQ9UGI8 421 aaKnown RBP15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 SNX7Q9UNH6 387 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 LALBAP00709 142 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 BSGP35613 385 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 GAS1P54826 345 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 FABP5Q01469 135 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 UBE3AQ05086 875 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 ASAH1Q13510 395 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 SNAPC1Q16533 368 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 KHDRBS2Q5VWX1 349 aaKnown RBP15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 KRT78Q8N1N4 520 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 MTIF3Q9H2K0 278 aaKnown RBP15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 OR51I1Q9H343 314 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 DPP7Q9UHL4 492 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 DIMT1Q9UNQ2 313 aaKnown RBP15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 CA5BQ9Y2D0 317 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 CPEP16870 476 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 DRD3P35462 400 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 GIPRP48546 466 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 CCT3P49368 545 aaKnown RBP15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 CST6Q15828 149 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 PIP5KL1Q5T9C9 394 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 IKBIPQ70UQ0 350 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 OR5P2Q8WZ92 322 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 MSLNLQ96KJ4 702 aa15.31■□□□□ 0.04
NKX3-1-201ENST00000380871 SDK1Q7Z5N4 2213 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 DVL2O14641 736 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 ERAL1O75616 437 aaKnown RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 HOXB3P14651 431 aaPredicted RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 MAN2A2P49641 1150 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TAS2R38P59533 333 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 OCLNQ16625 522 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 ZNF750Q32MQ0 723 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 SLC35F1Q5T1Q4 408 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TYW3Q6IPR3 259 aaKnown RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 LHFPL3Q86UP9 236 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 DCUN1D3Q8IWE4 304 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 NLGN4YQ8NFZ3 816 aaPredicted RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 ZNF514Q96K75 400 aaPredicted RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 PBX4Q9BYU1 374 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 YBX2Q9Y2T7 364 aaKnown RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 CLCA3PQ9Y6N3 262 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 POLR1CO15160 346 aaPredicted RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 LCMT2O60294 686 aaKnown RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 CH25HO95992 272 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 IL1AP01583 271 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 GPR19Q15760 415 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 LYPD8Q6UX82 237 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 NOXA1Q86UR1 476 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 LAPTM4BQ86VI4 370 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 VWA5B2Q8N398 1253 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 FAM26EQ8N5C1 309 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 FAM181AQ8N9Y4 354 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 RNFT2Q96EX2 444 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 C17orf62Q9BQA9 187 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 FNDC11Q9BVV2 318 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 WDR26Q9H7D7 661 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 ANKRA2Q9H9E1 313 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 B3GAT2Q9NPZ5 323 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 CNIH4Q9P003 139 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 ACAD8Q9UKU7 415 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TMA7Q9Y2S6 64 aaKnown RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 MAU2Q9Y6X3 613 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 VCANP13611 3396 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D3DA0A087WVF3 549 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D3IA0A087WXS9 549 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D3EA0A087X179 549 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D3KA0A087X1G2 549 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 A0A1W2PS29 197 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D3FA6NER0 549 aaPredicted RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D3LB9A6J9 549 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D3HP0C7X1 549 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 NR2F1P10589 423 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 PCBP4P57723 403 aaKnown RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 SGCGQ13326 291 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 DDI2Q5TDH0 399 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D3GQ6DHY5 549 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D3CQ6IPX1 549 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 XKRXQ6PP77 449 aa15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 TBC1D3Q8IZP1 549 aaPredicted RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 FBXO15Q8NCQ5 510 aaPredicted RBP15.3■□□□□ 0.04
NKX3-1-201ENST00000380871 OR8D4Q8NGM9 314 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms