RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 GPR78Q96P69 363 aa21■□□□□ 0.95
U2AF1-202ENST00000380276 OR2B2Q9GZK3 357 aa21■□□□□ 0.95
U2AF1-202ENST00000380276 ACBD3Q9H3P7 528 aa21■□□□□ 0.95
U2AF1-202ENST00000380276 PRODH2Q9UF12 536 aa21■□□□□ 0.95
U2AF1-202ENST00000380276 NDRG3Q9UGV2 375 aa21■□□□□ 0.95
U2AF1-202ENST00000380276 DKKL1Q9UK85 242 aa21■□□□□ 0.95
U2AF1-202ENST00000380276 PSME2Q9UL46 239 aa21■□□□□ 0.95
U2AF1-202ENST00000380276 ZNF780BQ9Y6R6 833 aa21■□□□□ 0.95
U2AF1-202ENST00000380276 NAV3Q8IVL0 2385 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 HMX2A2RU54 273 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 REM1O75628 298 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 SMNDC1O75940 238 aaKnown RBP eCLIP20.99■□□□□ 0.95
U2AF1-202ENST00000380276 ATP1B1P05026 303 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 TRAF3Q13114 568 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 TRMT12Q53H54 448 aaKnown RBP20.99■□□□□ 0.95
U2AF1-202ENST00000380276 TMEM81Q6P7N7 255 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 AAGABQ6PD74 315 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 SCIMPQ6UWF3 145 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 TAOK1Q7L7X3 1001 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 P3H2Q8IVL5 708 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 PLD6Q8N2A8 252 aaKnown RBP20.99■□□□□ 0.95
U2AF1-202ENST00000380276 OR4F6Q8NGB9 312 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 SELENOMQ8WWX9 145 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 WNT2BQ93097 391 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 TMBIM1Q969X1 311 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 TMCO6Q96DC7 493 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 SFXN2Q96NB2 322 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 NTMT1Q9BV86 223 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 PIGMQ9H3S5 423 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 FARSBQ9NSD9 589 aaKnown RBP20.99■□□□□ 0.95
U2AF1-202ENST00000380276 PCTPQ9UKL6 214 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 CES1P1Q9UKY3 287 aa20.99■□□□□ 0.95
U2AF1-202ENST00000380276 CBX7O95931 251 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 ALDOAP04075 364 aaKnown RBP20.98■□□□□ 0.95
U2AF1-202ENST00000380276 PCSK2P16519 638 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 MRPS35P82673 323 aaKnown RBP20.98■□□□□ 0.95
U2AF1-202ENST00000380276 MGAT2Q10469 447 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 WDSUB1Q8N9V3 476 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 DTNBP1Q96EV8 351 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 COL21A1Q96P44 957 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 FAIM2Q9BWQ8 316 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 ZBTB26Q9HCK0 441 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 XPR1Q9UBH6 696 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 PACSIN3Q9UKS6 424 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 PYCARDQ9ULZ3 195 aa20.98■□□□□ 0.95
U2AF1-202ENST00000380276 MAP1AP78559 2803 aaPredicted RBP20.97■□□□□ 0.95
U2AF1-202ENST00000380276 A0A1W2PPR1 153 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 PLOD2O00469 737 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 RBP1P09455 135 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 TSPAN8P19075 237 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 PHBP35232 272 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 KRT20P35900 424 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 PPICP45877 212 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 DUSP2Q05923 314 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 GAB1Q13480 694 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 C10orf62Q5T681 223 aaPredicted RBP20.97■□□□□ 0.95
U2AF1-202ENST00000380276 SHEQ5VZ18 495 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 OR5M10Q6IEU7 315 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 RPS27LQ71UM5 84 aaKnown RBP20.97■□□□□ 0.95
U2AF1-202ENST00000380276 CHMP1BQ7LBR1 199 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 PLCZ1Q86YW0 608 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 SMPDL3BQ92485 455 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 NTNG2Q96CW9 530 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 C6orf203Q9P0P8 240 aaPredicted RBP20.97■□□□□ 0.95
U2AF1-202ENST00000380276 ZNF639Q9UID6 485 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 FBXL2Q9UKC9 423 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 TMCO1Q9UM00 188 aa20.97■□□□□ 0.95
U2AF1-202ENST00000380276 ESYT3A0FGR9 886 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 FRG2CA6NGY1 282 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 STX16-NPEPL1H3BU86 382 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 STX16O14662 325 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 ARHGEF9O43307 516 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 PDYNP01213 254 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 DRD5P21918 477 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 IL12BP29460 328 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 SRD5A2P31213 254 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 HMGCS1Q01581 520 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 CNEP1R1Q8N9A8 125 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 TRPC4APQ8TEL6 797 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 TM4SF18Q96CE8 201 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 FAM111AQ96PZ2 611 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 ADOQ96SZ5 270 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 HBEGFQ99075 208 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 ANKRA2Q9H9E1 313 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 CLCF1Q9UBD9 225 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 UTS2RQ9UKP6 389 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 SNX6Q9UNH7 406 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 WIF1Q9Y5W5 379 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 MED12Q93074 2177 aa20.96■□□□□ 0.95
U2AF1-202ENST00000380276 NIPBLQ6KC79 2804 aaeCLIP20.96■□□□□ 0.95
U2AF1-202ENST00000380276 FLNAP21333 2647 aaKnown RBP20.95■□□□□ 0.94
U2AF1-202ENST00000380276 SMPD2O60906 423 aa20.95■□□□□ 0.94
U2AF1-202ENST00000380276 CHMP24386 653 aa20.95■□□□□ 0.94
U2AF1-202ENST00000380276 EMDP50402 254 aa20.95■□□□□ 0.94
U2AF1-202ENST00000380276 LHX2P50458 406 aa20.95■□□□□ 0.94
U2AF1-202ENST00000380276 GFRA1P56159 465 aa20.95■□□□□ 0.94
U2AF1-202ENST00000380276 GUCY2DQ02846 1103 aa20.95■□□□□ 0.94
U2AF1-202ENST00000380276 GALNT1Q10472 559 aaPredicted RBP20.95■□□□□ 0.94
U2AF1-202ENST00000380276 Q5PR19 223 aa20.95■□□□□ 0.94
U2AF1-202ENST00000380276 KRTAP1-3Q8IUG1 177 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms