RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 C1QTNF6Q9BXI9 259 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SLC25A18Q9H1K4 315 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CALHM2Q9HA72 323 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CSNK1G1Q9HCP0 422 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CALML5Q9NZT1 146 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 FLNBO75369 2602 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 TRIP12Q14669 1992 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SCN1AP35498 2009 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 A0A1W2PRB8 838 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 C7orf72A4D263 438 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SH3D21A4FU49 640 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 OR5K3A6NET4 321 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 PRORSD1PA6NEY8 169 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 EI24O14681 340 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 NPHS1O60500 1241 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 HSMCR30P0CW71 290 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ACRV1P26436 265 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SLC1A3P43003 542 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ZNF84P51523 738 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 AGFG1P52594 562 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 PCDH1Q08174 1060 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 KLHL26Q53HC5 615 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SMUG1Q53HV7 270 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 KIAA0930Q6ICG6 404 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SLC30A6Q6NXT4 461 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ABRAXAS1Q6UWZ7 409 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 FAM220AQ7Z4H9 259 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 RANBP3LQ86VV4 465 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 LGI4Q8N135 537 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 VWA5B2Q8N398 1253 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 MOSPD2Q8NHP6 518 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 KIAA1191Q96A73 305 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 EFHD2Q96C19 240 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 LRRC58Q96CX6 371 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 RSPRY1Q96DX4 576 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ASB9Q96DX5 294 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 TIMD4Q96H15 378 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 NSUN5Q96P11 429 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SECISBP2Q96T21 854 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 BEX2Q9BXY8 128 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CLMPQ9H6B4 373 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 AKTIPQ9H8T0 292 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 HHATLQ9HCP6 504 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CSNK1G3Q9Y6M4 447 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 U3KQV3 271 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 TRIP11Q15643 1979 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 K7EQS6 105 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 PPP6CO00743 305 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CHST10O43529 356 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CSTAP01040 98 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SLC19A1P41440 591 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ACTG1P63261 375 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ARL9Q6T311 187 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 MEX3BQ6ZN04 569 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 TMEM171Q8WVE6 324 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 IL26Q9NPH9 171 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 TMEM30AQ9NV96 361 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 MARCH4Q9P2E8 410 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 PILRBQ9UKJ0 227 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 PRAMEF33A0A0G2JMD5 474 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 C17orf113A0A1B0GUU1 675 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 TMEM8BA6NDV4 472 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 I6L893 689 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-202ENST00000379446 PRAMEF10O60809 474 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 RAB36O95755 333 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 LDLRP01130 860 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 IL6P05231 212 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 ZNF888P0CJ79 500 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-202ENST00000379446 OR12D1P0DN82 309 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 SLC26A3P40879 764 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 ARSDP51689 593 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 GALNT1Q10472 559 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-202ENST00000379446 PRSS36Q5K4E3 855 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 ZNF362Q5T0B9 420 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-202ENST00000379446 TMEM236Q5W0B7 351 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 IGFN1Q86VF2 1251 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 ANKRD46Q86W74 232 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 KCNN1Q92952 543 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 ZNF419Q96HQ0 510 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-202ENST00000379446 PPM1MQ96MI6 270 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 ADOQ96SZ5 270 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 BOCQ9BWV1 1114 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 NARFLQ9H6Q4 476 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 ARNT2Q9HBZ2 717 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 VPS29Q9UBQ0 182 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 OAZ3Q9UMX2 235 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 CORINQ9Y5Q5 1042 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 PLCE1Q9P212 2302 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 HTRA2O43464 458 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-202ENST00000379446 TNFRSF21O75509 655 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 RSL1D1O76021 490 aaKnown RBP6.17□□□□□ -1.42
NEDD9-202ENST00000379446 C1GALT1C1LP0DN25 315 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 CBSLP0DN79 551 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 ELK4P28324 431 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 S100A5P33763 92 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 CBSP35520 551 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 MMP12P39900 470 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 CAMK1Q14012 370 aa6.17□□□□□ -1.42
NEDD9-202ENST00000379446 ZNF528Q3MIS6 628 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms