RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 SVOPLQ8N434 492 aa6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 OR10G2Q8NGC3 310 aa6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 OR9Q1Q8NGQ5 310 aa6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 WDR36Q8NI36 951 aaKnown RBP6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 OR8D1Q8WZ84 308 aa6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 PIK3R3Q92569 461 aa6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 CXorf58Q96LI9 332 aa6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 RDH12Q96NR8 316 aa6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 PPP1R2P1Q96PQ5 205 aa6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 KLHDC3Q9BQ90 382 aa6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 TESQ9UGI8 421 aaKnown RBP6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 TRMT6Q9UJA5 497 aaKnown RBP6.91□□□□□ -1.3
GPCPD1-201ENST00000379019 LRRC72A6NJI9 287 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 ARHGEF33A8MVX0 844 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 PRNPP04156 253 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 FGF1P05230 155 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SLC2A2P11168 524 aaPredicted RBP6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 ACADMP11310 421 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 XCR1P46094 333 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 BDKRB1P46663 353 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 CXCR4P61073 352 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 FCN2Q15485 313 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 BTBD16Q32M84 506 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 HNRNPA1L2Q32P51 320 aaKnown RBP6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 C6orf132Q5T0Z8 1188 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SERPINA11Q86U17 422 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SELENOMQ8WWX9 145 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 CHFRQ96EP1 664 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 IL17FQ96PD4 163 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 NUSAP1Q9BXS6 441 aaKnown RBP6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 ERVW-1Q9UQF0 538 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 A0A1W2PPK0 400 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SAGE2PA6NJ88 616 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 WNT9AO14904 365 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 TSC22D2O75157 780 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 S100A1P23297 94 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 HSD3B2P26439 372 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 PXNP49023 591 aaPredicted RBP6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 RPIAP49247 311 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 CCR6P51684 374 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 RPE65Q16518 533 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SSX6Q7RTT6 188 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SYT12Q8IV01 421 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 TCEANCQ8N8B7 351 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SREK1Q8WXA9 508 aaKnown RBP6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 LINC00052Q96N35 136 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 ASB8Q9H765 288 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 CA10Q9NS85 328 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SPTBN1Q01082 2364 aaKnown RBP6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 LOC105369274A0A096LPK9 316 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SLC30A4O14863 429 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 CHP2O43745 196 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 GATBO75879 557 aaKnown RBP6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 CCNDBP1O95273 360 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 TRHRP34981 398 aaPredicted RBP6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 PCBP3P57721 371 aaKnown RBP6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SELENOWP63302 87 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 TUSC1Q2TAM9 212 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SLC25A35Q3KQZ1 300 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 CRTC1Q6UUV9 634 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SEZ6L2Q6UXD5 910 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 DPY19L3Q6ZPD9 716 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 AMIGO1Q86WK6 493 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 OR4N4Q8N0Y3 316 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 C17orf47Q8NEP4 570 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SPPL2AQ8TCT8 520 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 TRIM63Q969Q1 353 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 SNX18Q96RF0 628 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 TM7SF3Q9NS93 570 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 NPAP1Q9NZP6 1156 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 COMMD3Q9UBI1 195 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 HSPB11Q9Y547 144 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 KCNMB2Q9Y691 235 aa6.9□□□□□ -1.3
GPCPD1-201ENST00000379019 TRBV5-4A0A0C4DH59 114 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 WASH3PC4AMC7 463 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 CDC42EP2O14613 210 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 CHST10O43529 356 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 WDR47O94967 919 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 ALPPP05187 535 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 RPLP0P05388 317 aaKnown RBP6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 LPOP22079 712 aaPredicted RBP6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 ACRV1P26436 265 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 SH3BGRP55822 239 aaPredicted RBP6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 CRYZQ08257 329 aaKnown RBP6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 ELAVL3Q14576 367 aaKnown RBP6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 SYPL1Q16563 259 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 SLC36A2Q495M3 483 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 PLK5Q496M5 336 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 FNDC3BQ53EP0 1204 aaKnown RBP6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 INO80DQ53TQ3 878 aaPredicted RBP6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 SLC23A3Q6PIS1 610 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 HORMAD2Q8N7B1 307 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 OR52I1Q8NGK6 324 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 TRAF4Q9BUZ4 470 aaPredicted RBP6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 REG4Q9BYZ8 158 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 PARVBQ9HBI1 364 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 POPDC3Q9HBV1 291 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 ATP13A2Q9NQ11 1180 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 MOKQ9UQ07 419 aa6.9□□□□□ -1.31
GPCPD1-201ENST00000379019 POLHQ9Y253 713 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms