RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 RORAP35398 523 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 RGRP47804 291 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 SLC9B2Q86UD5 537 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 GPR26Q8NDV2 337 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 OR6C4Q8NGE1 309 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ARMC5Q96C12 935 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 OTUB2Q96DC9 234 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 KLF16Q9BXK1 252 aaPredicted RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 SAP130Q9H0E3 1048 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 CXCL16Q9H2A7 254 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 SLC28A3Q9HAS3 691 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 TAS2R3Q9NYW6 316 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 PGAP2Q9UHJ9 254 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 NOP16Q9Y3C1 178 aaKnown RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 RBBP6Q7Z6E9 1792 aaKnown RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 GABRPO00591 440 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 DBIP07108 87 aaKnown RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 MSL3P1P0C860 447 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 GIMD1P0DJR0 217 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 TYRP14679 529 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ELNP15502 786 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 SSTR4P31391 388 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ART1P52961 327 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 POU6F2P78424 691 aaPredicted RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ENPP2Q13822 863 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 AAK1Q2M2I8 961 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM173Q86WV6 379 aaPredicted RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ZFAND1Q8TCF1 268 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 THAP4Q8WY91 577 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 SCAMP4Q969E2 229 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 SLC25A46Q96AG3 418 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 RBM18Q96H35 190 aaKnown RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 CWH43Q9H720 699 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 BEX1Q9HBH7 125 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 TREM1Q9NP99 234 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 LOC102723532A0A0G2JNH3 316 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 K7ERQ8 282 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 POLR1CO15160 346 aaPredicted RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 UBXN7O94888 489 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 TFP02787 698 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF823P16415 610 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 MTNR1BP49286 362 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 FGFBP1Q14512 234 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 MORN1Q5T089 497 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 Q6ZPB1 254 aaPredicted RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 RNF165Q6ZSG1 346 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 TAF8Q7Z7C8 310 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 LRRC56Q8IYG6 542 aaPredicted RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 OR4K14Q8NGD5 310 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 OR56A3Q8NH54 315 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 F2RL3Q96RI0 385 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 BTBD2Q9BX70 525 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 TRAPPC4Q9Y296 219 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 NME7Q9Y5B8 376 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 PHYHO14832 338 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ALAS2P22557 587 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ATP5A1P25705 553 aaKnown RBP8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ITPKBP27987 946 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 S100GP29377 79 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 MMP12P39900 470 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 GPR4P46093 362 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ARF5P84085 180 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 PLPP4Q5VZY2 271 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 PODNL1Q6PEZ8 512 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 DLK2Q6UY11 383 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ACTRT3Q9BYD9 372 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 ARL6Q9H0F7 186 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 OR10A4Q9H209 315 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 FN3KQ9H479 309 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 EMC3Q9P0I2 261 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 GPR52Q9Y2T5 361 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 TRAPPC13A5PLN9 417 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TEX46H3BTG2 121 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 J3KTA2 159 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TNFRSF10BO14763 440 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 INPPL1O15357 1258 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 SLC16A8O95907 504 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 C8orf89P0DMQ9 161 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 PRPH2P23942 346 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 GPR143P51810 404 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 SLAMF1Q13291 335 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 GALEQ14376 348 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM107Q6UX40 140 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 IFNL1Q8IU54 200 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ARMC10Q8N2F6 343 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 NANOGP1Q8N7R0 232 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 FBXO15Q8NCQ5 510 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 OR5M11Q96RB7 305 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM106CQ9BVX2 250 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 POTEKPQ9BYX7 375 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 MTHFD2LQ9H903 347 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 NDUFAF4Q9P032 175 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 POLHQ9Y253 713 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TRBV2A0A0J9YWF9 115 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 HMGB3O15347 200 aaKnown RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 RNF13O43567 381 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 DPM1O60762 260 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 PET100P0DJ07 73 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ACP5P13686 325 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 GTF2F2P13984 249 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms