RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 PRDX1Q06830 199 aaKnown RBP12.91□□□□□ -0.34
C9orf47-203ENST00000375851 CDK5R2Q13319 367 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 PROX2Q3B8N5 592 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 TANGO2Q6ICL3 276 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 ARHGAP11AQ6P4F7 1023 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 IQCF1Q8N6M8 205 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 WFDC5Q8TCV5 224 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 SLC41A3Q96GZ6 507 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 LPAR4Q99677 370 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 ZNF559Q9BR84 538 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 ALOXE3Q9BYJ1 711 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 PPP4R1LQ9P1A2 415 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 MAGED1Q9Y5V3 778 aaPredicted RBP12.91□□□□□ -0.34
C9orf47-203ENST00000375851 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 HMX2A2RU54 273 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 PRKCAP17252 672 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 PGFP49763 221 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 HSD17B12Q53GQ0 312 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 PGM2L1Q6PCE3 622 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 CYP4V2Q6ZWL3 525 aaPredicted RBP12.91□□□□□ -0.34
C9orf47-203ENST00000375851 PAQR7Q86WK9 346 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 SPPL3Q8TCT6 385 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 TOE1Q96GM8 510 aaKnown RBP12.91□□□□□ -0.34
C9orf47-203ENST00000375851 FRMD6Q96NE9 622 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 TIMM29Q9BSF4 260 aa12.91□□□□□ -0.34
C9orf47-203ENST00000375851 PITHD1Q9GZP4 211 aaPredicted RBP12.91□□□□□ -0.34
C9orf47-203ENST00000375851 CUEDC1Q9NWM3 386 aaPredicted RBP12.91□□□□□ -0.34
C9orf47-203ENST00000375851 ARID1BQ8NFD5 2236 aaPredicted RBP12.91□□□□□ -0.34
C9orf47-203ENST00000375851 TNRC6CQ9HCJ0 1690 aaKnown RBP12.91□□□□□ -0.34
C9orf47-203ENST00000375851 C17orf113A0A1B0GUU1 675 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 C5orf51A6NDU8 294 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 C6orf132Q5T0Z8 1188 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 C1orf94Q6P1W5 598 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 RLN3Q8WXF3 142 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 TFAP2CQ92754 450 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 ZNF597Q96LX8 424 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 NHSQ6T4R5 1651 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 KIR2DS5A0A0G2JLQ3 304 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 A0A0G2JNG1 304 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 KIR2DS3K7RE56 304 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 CDC40O60508 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
C9orf47-203ENST00000375851 RDH16O75452 317 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 HIST1H1TP22492 207 aaPredicted RBP12.9□□□□□ -0.34
C9orf47-203ENST00000375851 STT3AP46977 705 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 NCS1P62166 190 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 KIR2DS5Q14953 304 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 PLBD1Q6P4A8 553 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 SBSNQ6UWP8 590 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 Q6ZSR9 355 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 ZNF765Q7L2R6 523 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 METTL25Q8N6Q8 603 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 OR52E2Q8NGJ4 325 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 OR5L2Q8NGL0 311 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 OR4K13Q8NH42 304 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 CLCC1Q96S66 551 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 STRADBQ9C0K7 418 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 ASB6Q9NWX5 421 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 A0A0A6YYC8 382 aaPredicted RBP12.9□□□□□ -0.34
C9orf47-203ENST00000375851 ZNF878C9JN71 531 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 I3L1I5 382 aaPredicted RBP12.9□□□□□ -0.34
C9orf47-203ENST00000375851 PRAMEF2O60811 474 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 ZNF432O94892 652 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 CPOXP36551 454 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 ARRDC3Q96B67 414 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 HDHD5Q9BXW7 423 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 SCN7AQ01118 1682 aa12.9□□□□□ -0.34
C9orf47-203ENST00000375851 A0A1W2PPL8 197 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 PLOD2O00469 737 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 TFPTP0C1Z6 253 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 IMPA1P29218 277 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 NFATC3Q12968 1075 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 SERTAD2Q14140 314 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 SLC5A12Q1EHB4 618 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 MFSD6LQ8IWD5 586 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 GATA6Q92908 595 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 TMIGD2Q96BF3 282 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 TMEM41AQ96HV5 264 aa12.9□□□□□ -0.35
C9orf47-203ENST00000375851 A0A0J9YY10 115 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 PRSS38A1L453 326 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 OR7A17O14581 309 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 CDKN2CP42773 168 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 HBA1P69905 142 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 OTUD1Q5VV17 481 aaPredicted RBP12.89□□□□□ -0.35
C9orf47-203ENST00000375851 TMEM151BQ8IW70 566 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 VWA5B2Q8N398 1253 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 ZNF548Q8NEK5 533 aaPredicted RBP12.89□□□□□ -0.35
C9orf47-203ENST00000375851 GRPEL2Q8TAA5 225 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 BIRC8Q96P09 236 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 HHIPQ96QV1 700 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 LHPPQ9H008 270 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 CNIH4Q9P003 139 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 TRBV2A0A0J9YWF9 115 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 LCKP06239 509 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 PVRP15151 417 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 RPL34P49207 117 aaKnown RBP12.89□□□□□ -0.35
C9orf47-203ENST00000375851 PRAMEF17Q5VTA0 474 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 GPR149Q86SP6 731 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 IQCF2Q8IXL9 164 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 ZNF283Q8N7M2 679 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 NELL2Q99435 816 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms