RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 UGT2B11O75310 529 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 SEC22BO75396 215 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 PPM1BO75688 479 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 JUNP05412 331 aaKnown RBP14.28□□□□□ -0.12
SDHB-201ENST00000375499 LINC00032P0C843 101 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 CT45A8P0DMV1 189 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 CT45A9P0DMV2 189 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 MC3RP41968 323 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 CASP3P42574 277 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 GSTM5P46439 218 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 NRG3P56975 720 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 RPL38P63173 70 aaKnown RBP14.28□□□□□ -0.12
SDHB-201ENST00000375499 CT45A2Q5DJT8 189 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 ANKRD26P1Q6NSI1 321 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 RNF165Q6ZSG1 346 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 FAM9CQ8IZT9 166 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 OR6Y1Q8NGX8 325 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 CLHC1Q8NHS4 586 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 FAM76AQ8TAV0 307 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 TWIST2Q8WVJ9 160 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 PKNOX2Q96KN3 472 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 ZNF597Q96LX8 424 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 VSTM2LQ96N03 204 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 TRMOQ9BU70 441 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 GLIPR2Q9H4G4 154 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 FOLH1BQ9HBA9 442 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 C1orf109Q9NX04 203 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 BOKQ9UMX3 212 aaPredicted RBP14.28□□□□□ -0.12
SDHB-201ENST00000375499 CFL2Q9Y281 166 aa14.28□□□□□ -0.12
SDHB-201ENST00000375499 KIAA1549Q9HCM3 1950 aa14.27□□□□□ -0.12
SDHB-201ENST00000375499 ANKRD33BA6NCL7 494 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 FRG2CA6NGY1 282 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 SLC28A1O00337 649 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 AQP7O14520 342 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 TP53I11O14683 189 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 PIP5K1BO14986 540 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 BPGMP07738 259 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 SDC1P18827 310 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 PPICP45877 212 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 TRPC1P48995 793 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 TMED10P49755 219 aaKnown RBP14.27□□□□□ -0.13
SDHB-201ENST00000375499 NCBP2P52298 156 aaKnown RBP eCLIP14.27□□□□□ -0.13
SDHB-201ENST00000375499 PLCXD2Q0VAA5 305 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 SLC10A1Q14973 349 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 TESK1Q15569 626 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 GXYLT1Q4G148 440 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 RFTN2Q52LD8 501 aaPredicted RBP14.27□□□□□ -0.13
SDHB-201ENST00000375499 SH2D4BQ5SQS7 431 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 RTL6Q6ICC9 239 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 TMEM107Q6UX40 140 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 WDR53Q7Z5U6 358 aaPredicted RBP14.27□□□□□ -0.13
SDHB-201ENST00000375499 OR4N2Q8NGD1 307 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 TMBIM1Q969X1 311 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 HSPBAP1Q96EW2 488 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 TSSK3Q96PN8 268 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 BTBD9Q96Q07 612 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 BBS4Q96RK4 519 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 ANGPTL4Q9BY76 406 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 UBQLN3Q9H347 655 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 GALNT9Q9HCQ5 603 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 GIMAP4Q9NUV9 329 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 PRODH2Q9UF12 536 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 GPR55Q9Y2T6 319 aaPredicted RBP14.27□□□□□ -0.13
SDHB-201ENST00000375499 FAM215AQ9Y5M1 114 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 ARHGAP21Q5T5U3 1957 aa14.27□□□□□ -0.13
SDHB-201ENST00000375499 TRGV5A0A0B4J1U4 118 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 C2orf72A6NCS6 295 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 C17orf51A8MQB3 221 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 CAPN14A8MX76 684 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 GNB5O14775 395 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 TO15178 435 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 PLOD3O60568 738 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 FGF4P08620 206 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 DRD5P21918 477 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 MAN2A2P49641 1150 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 GALNTL6Q49A17 601 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 PAOXQ6QHF9 649 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 EXOC3L1Q86VI1 746 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 SAMD14Q8IZD0 417 aaPredicted RBP14.26□□□□□ -0.13
SDHB-201ENST00000375499 CIDECQ96AQ7 238 aaPredicted RBP14.26□□□□□ -0.13
SDHB-201ENST00000375499 SDCCAG3Q96C92 435 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 C3orf30Q96M34 536 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 AMDHD1Q96NU7 426 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 GNRHR2Q96P88 292 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 ZIM3Q96PE6 472 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 SECISBP2Q96T21 854 aaKnown RBP14.26□□□□□ -0.13
SDHB-201ENST00000375499 TRIM8Q9BZR9 551 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 TP63Q9H3D4 680 aaPredicted RBP14.26□□□□□ -0.13
SDHB-201ENST00000375499 LDAHQ9H6V9 325 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 ZNF395Q9H8N7 513 aaPredicted RBP14.26□□□□□ -0.13
SDHB-201ENST00000375499 MIEF1Q9NQG6 463 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 RYDENQ9NUL5 291 aaKnown RBP14.26□□□□□ -0.13
SDHB-201ENST00000375499 TAS2R7Q9NYW3 318 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 BAIAP2L1Q9UHR4 511 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 ZDHHC2Q9UIJ5 367 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 ITGB1BP2Q9UKP3 347 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 TRAF6Q9Y4K3 522 aa14.26□□□□□ -0.13
SDHB-201ENST00000375499 MTORP42345 2549 aa14.25□□□□□ -0.13
SDHB-201ENST00000375499 OR14I1A6ND48 311 aa14.25□□□□□ -0.13
SDHB-201ENST00000375499 KDM4EB2RXH2 506 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms