RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 PLD6Q8N2A8 252 aaKnown RBP12.52□□□□□ -0.41
CXCL12-202ENST00000374426 PTGR2Q8N8N7 351 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-202ENST00000374426 ADCY4Q8NFM4 1077 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 RDH11Q8TC12 318 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 TRPC4APQ8TEL6 797 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 ATP6V1E2Q96A05 226 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 CTHRC1Q96CG8 243 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 ARSGQ96EG1 525 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 PHF21BQ96EK2 531 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 NSUN5Q96P11 429 aaKnown RBP12.52□□□□□ -0.41
CXCL12-202ENST00000374426 NTMT1Q9BV86 223 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 ZBTB26Q9HCK0 441 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 AHSPQ9NZD4 102 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 PCTPQ9UKL6 214 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 PLLPQ9Y342 182 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 HIVEP2P31629 2446 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 A0A1B0GTL3 188 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 C1orf226A1L170 272 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 A8MXE2 369 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 PLOD2O00469 737 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 TO15178 435 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 ERAL1O75616 437 aaKnown RBP12.51□□□□□ -0.41
CXCL12-202ENST00000374426 TNFSF13O75888 250 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 CSNK2A2P19784 350 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-202ENST00000374426 DRD5P21918 477 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 TYK2P29597 1187 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 DEKP35659 375 aaKnown RBP12.51□□□□□ -0.41
CXCL12-202ENST00000374426 PPICP45877 212 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 EMDP50402 254 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 LHX2P50458 406 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 HMGCS1Q01581 520 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 GALNT1Q10472 559 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-202ENST00000374426 LTB4RQ15722 352 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 TRMT12Q53H54 448 aaKnown RBP12.51□□□□□ -0.41
CXCL12-202ENST00000374426 SGO1Q5FBB7 561 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 C10orf62Q5T681 223 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-202ENST00000374426 TTC19Q6DKK2 380 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-202ENST00000374426 FAM180BQ6P0A1 224 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 IFNEQ86WN2 208 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 OR52R1Q8NGF1 315 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 TM4SF18Q96CE8 201 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 ACBD3Q9H3P7 528 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 PIGMQ9H3S5 423 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 FARSBQ9NSD9 589 aaKnown RBP12.51□□□□□ -0.41
CXCL12-202ENST00000374426 TAS2R10Q9NYW0 307 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 FBXL2Q9UKC9 423 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 PACSIN3Q9UKS6 424 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 UTP11Q9Y3A2 253 aaKnown RBP12.51□□□□□ -0.41
CXCL12-202ENST00000374426 TESMINQ9Y4I5 508 aa12.51□□□□□ -0.41
CXCL12-202ENST00000374426 FRG2CA6NGY1 282 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 B4DXG7 233 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 CASKO14936 926 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 SIAH2O43255 324 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 GUCY1B2O75343 617 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 TGM6O95932 706 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 HEXAP06865 529 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 PCSK2P16519 638 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 ZNF708P17019 499 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 CHMP24386 653 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 SRD5A2P31213 254 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 SERPINB8P50452 374 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 CLDN18P56856 261 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 MRPS35P82673 323 aaKnown RBP12.5□□□□□ -0.41
CXCL12-202ENST00000374426 IFT88Q13099 833 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 GAB1Q13480 694 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 UAP1Q16222 522 aaPredicted RBP12.5□□□□□ -0.41
CXCL12-202ENST00000374426 GGTA1PQ4G0N0 100 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 FAM219BQ5XKK7 198 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 PLCZ1Q86YW0 608 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 OR4F6Q8NGB9 312 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 TMBIM1Q969X1 311 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 KLHL29Q96CT2 875 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 CNRIP1Q96F85 164 aaPredicted RBP12.5□□□□□ -0.41
CXCL12-202ENST00000374426 ZNF681Q96N22 645 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 COL21A1Q96P44 957 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 VPS11Q9H270 941 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 NDRG3Q9UGV2 375 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 SLC12A4Q9UP95 1085 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 EIF3LQ9Y262 564 aaKnown RBP12.5□□□□□ -0.41
CXCL12-202ENST00000374426 GPR55Q9Y2T6 319 aaPredicted RBP12.5□□□□□ -0.41
CXCL12-202ENST00000374426 STAB1Q9NY15 2570 aa12.5□□□□□ -0.41
CXCL12-202ENST00000374426 A0A1W2PNV4 684 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 OR6C70A6NIJ9 312 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 STX16-NPEPL1H3BU86 382 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 PPP6CO00743 305 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 STX16O14662 325 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 HCRTR2O43614 444 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 CPOXP36551 454 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 DIO3P55073 304 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 FAM27E3Q08E93 113 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 Q5PR19 223 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 UBAP2Q5T6F2 1119 aaKnown RBP12.49□□□□□ -0.41
CXCL12-202ENST00000374426 AAGABQ6PD74 315 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 RPS27LQ71UM5 84 aaKnown RBP12.49□□□□□ -0.41
CXCL12-202ENST00000374426 MILR1Q7Z6M3 343 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 GRAMD2AQ8IUY3 354 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 CIARTQ8N365 385 aaPredicted RBP12.49□□□□□ -0.41
CXCL12-202ENST00000374426 ZNF592Q92610 1267 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 TMCO6Q96DC7 493 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms