RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ZNF540Q8NDQ6 660 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 OR9A4Q8NGU2 314 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 RHOXF1Q8NHV9 184 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 SLC7A13Q8TCU3 470 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 COG8Q96MW5 612 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 TBC1D17Q9HA65 648 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 DNAAF2Q9NVR5 837 aaKnown RBP18.34■□□□□ 0.53
HDAC1-201ENST00000373548 FTSJ1Q9UET6 329 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 ENOPH1Q9UHY7 261 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 C19orf53Q9UNZ5 99 aaPredicted RBP18.34■□□□□ 0.53
HDAC1-201ENST00000373548 PCDHGA10Q9Y5H3 936 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 FCMRO60667 390 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 UGT2B17O75795 530 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 RAB38P57729 211 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 NXPH1P58417 271 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 PTGES3Q15185 160 aaKnown RBP18.33■□□□□ 0.52
HDAC1-201ENST00000373548 PRTGQ2VWP7 1150 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 CWF19L1Q69YN2 538 aaKnown RBP18.33■□□□□ 0.52
HDAC1-201ENST00000373548 Q7L0L9 218 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 C17orf82Q86X59 251 aaPredicted RBP18.33■□□□□ 0.52
HDAC1-201ENST00000373548 CCDC103Q8IW40 242 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 DNAJC22Q8N4W6 341 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 SLC9A6Q92581 669 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 TANKQ92844 425 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 SLC38A3Q99624 504 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 ANKHQ9HCJ1 492 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 ZNF226Q9NYT6 803 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 SPTBP11277 2137 aa18.33■□□□□ 0.52
HDAC1-201ENST00000373548 A0A1W2PRQ8 180 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 SH3PXD2BA1X283 911 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 SYT5O00445 386 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 AQP9O43315 295 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 ATE1O95260 518 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 ACP2P11117 423 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 BCKDHBP21953 392 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 CHMP24386 653 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 DGCR6Q14129 220 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 DUSP5Q16690 384 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 DEFB133Q30KQ1 61 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 FAM92BQ6ZTR7 304 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 CAMKK1Q8N5S9 505 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 FAR1Q8WVX9 515 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 DGCR6LQ9BY27 220 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 MAN2C1Q9NTJ4 1040 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 TMEM9Q9P0T7 183 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 REV1Q9UBZ9 1251 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 MGAT4BQ9UQ53 548 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 CHST2Q9Y4C5 530 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 PCDH15Q96QU1 1955 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 OR10H3O60404 316 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 INMTO95050 263 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 MED26O95402 600 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 AGR2O95994 175 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 MT-ND2P03891 347 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 FOSL2P15408 326 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 GABRB1P18505 474 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 MASP1P48740 699 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 CRISP1P54107 249 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 MLIPQ5VWP3 458 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 PGBD2Q6P3X8 592 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 FRRS1Q6ZNA5 592 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 P3H2Q8IVL5 708 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 DEPDC4Q8N2C3 294 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 CLDN23Q96B33 292 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 ANKRD9Q96BM1 317 aaPredicted RBP18.32■□□□□ 0.52
HDAC1-201ENST00000373548 PRRC1Q96M27 445 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 SIGLEC11Q96RL6 698 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 ARHGDIGQ99819 225 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 FNDC11Q9BVV2 318 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.32■□□□□ 0.52
HDAC1-201ENST00000373548 CCNB1IP1Q9NPC3 277 aa18.32■□□□□ 0.52
HDAC1-201ENST00000373548 GPR55Q9Y2T6 319 aaPredicted RBP18.32■□□□□ 0.52
HDAC1-201ENST00000373548 A0A087WV62 115 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 ZAR1LA6NP61 321 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 LMO7DNF2Z398 122 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 RGS10O43665 173 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 SDC3O75056 442 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 NT5EP21589 574 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 MAP2K4P45985 399 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 GP2P55259 537 aaKnown RBP18.31■□□□□ 0.52
HDAC1-201ENST00000373548 HNRNPKP61978 463 aaKnown RBP eCLIP18.31■□□□□ 0.52
HDAC1-201ENST00000373548 CSNK2BP67870 215 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 HPCAP84074 193 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 PRICKLE4Q2TBC4 344 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 EXOSC6Q5RKV6 272 aaKnown RBP18.31■□□□□ 0.52
HDAC1-201ENST00000373548 TMEM236Q5W0B7 351 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 PODNL1Q6PEZ8 512 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 UCK2Q9BZX2 261 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 ADAP2Q9NPF8 381 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 MAT2BQ9NZL9 334 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 MKLN1Q9UL63 735 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 SLC6A14Q9UN76 642 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 CLCA2Q9UQC9 943 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 M0R129 80 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 CHST10O43529 356 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 PLOD3O60568 738 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 TPST2O60704 377 aa18.31■□□□□ 0.52
HDAC1-201ENST00000373548 CSNK1EP49674 416 aaKnown RBP18.31■□□□□ 0.52
HDAC1-201ENST00000373548 MAPK10P53779 464 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms