RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 BDH1Q02338 343 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 TRIB2Q92519 343 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 CHFRQ96EP1 664 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 EIF3FO00303 357 aaPredicted RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 ZNF217O75362 1048 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 TMEM225BP0DP42 221 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 ZNF33BQ06732 778 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 AKR1C8PQ5T2L2 129 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 UBE2UQ5VVX9 321 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 FIGLAQ6QHK4 219 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 OR14L1PQ8NHC6 308 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 C7orf43Q8WVR3 580 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 SLC41A3Q96GZ6 507 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 NECTIN4Q96NY8 510 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 SSX3Q99909 188 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 DPH2Q9BQC3 489 aaPredicted RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 FAM72CH0Y354 149 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 AMY2AP04746 511 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 RABIFP47224 123 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 MTNR1AP48039 350 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 TDGQ13569 410 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 CST6Q15828 149 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 FAM72AQ5TYM5 149 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 FAM72DQ6L9T8 149 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 PSAPL1Q6NUJ1 521 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 FAM72BQ86X60 149 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 HORMAD2Q8N7B1 307 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 LPAR4Q99677 370 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 VRK1Q99986 396 aaPredicted RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 CNOT11Q9UKZ1 510 aaKnown RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 MAFKO60675 156 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 SLC16A8O95907 504 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 SLC35E2BP0CK96 405 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 PRPS1P60891 318 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 PIGFQ07326 219 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 FAM182AQ5T1J6 154 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 TAS1R3Q7RTX0 852 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 OR8K5Q8NH50 307 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 CREB3L4Q8TEY5 395 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 C16orf78Q8WTQ4 265 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 ZDHHC1Q8WTX9 485 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 BIRC8Q96P09 236 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 PAPOLGQ9BWT3 736 aaKnown RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 TXNRD2Q9NNW7 524 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 POLE4Q9NR33 117 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 TMEM100Q9NV29 134 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 ZNF840PA6NDX5 716 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 ZNF43P17038 809 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 DLSTP36957 453 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 ERVK-16P61578 105 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 RPS26P62854 115 aaKnown RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 RPP30P78346 268 aaKnown RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 TMEM151BQ8IW70 566 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 KLHDC8AQ8IYD2 350 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 OR9A4Q8NGU2 314 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 FAM46AQ96IP4 442 aaKnown RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 DPCDQ9BVM2 203 aaPredicted RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 ATXN7L1Q9ULK2 861 aaPredicted RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 SYT7O43581 403 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 ALDOAP04075 364 aaKnown RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 CDKN2DP55273 166 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 CYCSP99999 105 aaKnown RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 RBM39Q14498 530 aaKnown RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 NSDHLQ15738 373 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.97□□□□□ -0.65
VCL-202ENST00000372755 CYS1Q717R9 158 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 OR4K13Q8NH42 304 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 PEX11GQ96HA9 241 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 TMEM19Q96HH6 336 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 SERINC2Q96SA4 455 aa10.97□□□□□ -0.65
VCL-202ENST00000372755 KIAA0355O15063 1070 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 NTSR1P30989 418 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 SHC2P98077 582 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 GK3PQ14409 553 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 EEF1A1P5Q5VTE0 462 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 WDR53Q7Z5U6 358 aaPredicted RBP10.96□□□□□ -0.65
VCL-202ENST00000372755 PPP1R35Q8TAP8 253 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 TSACCQ96A04 125 aaPredicted RBP10.96□□□□□ -0.65
VCL-202ENST00000372755 DNAJA3Q96EY1 480 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 SLC6A16Q9GZN6 736 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 PREBQ9HCU5 417 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 C3P01024 1663 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 A6NIZ1 184 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 A8MVJ9 347 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 RAB4BP61018 213 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 RAP1BP61224 184 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 RAP1AP62834 184 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 PON2Q15165 354 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 PLGLAQ15195 96 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 PTPRRQ15256 657 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 DUS1LQ6P1R4 473 aaKnown RBP10.96□□□□□ -0.65
VCL-202ENST00000372755 SPIN2AQ99865 258 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 SPIN2BQ9BPZ2 258 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 CACNG6Q9BXT2 260 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 POLR1CO15160 346 aaPredicted RBP10.96□□□□□ -0.65
VCL-202ENST00000372755 PEX14O75381 377 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 STC2O76061 302 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 OTX2P32243 289 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 CTXN1P60606 82 aa10.96□□□□□ -0.65
VCL-202ENST00000372755 CSNK2A1P68400 391 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms