RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 IMPA1P29218 277 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 ARL6IP1Q15041 203 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 TXNDC5Q8NBS9 432 aaKnown RBP14.58□□□□□ -0.08
COL5A1-201ENST00000371817 DISP1Q96F81 1524 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 GAPDHSO14556 408 aaPredicted RBP14.58□□□□□ -0.08
COL5A1-201ENST00000371817 FANCGO15287 622 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 PTNP21246 168 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 MLC1Q15049 377 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 TTLL10Q6ZVT0 673 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 PLA2G15Q8NCC3 412 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 TMIGD2Q96BF3 282 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 TMEM39AQ9NV64 488 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 FBXL4Q9UKA2 621 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 A8MU76 341 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 NRLP54845 237 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 APOFQ13790 326 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 CYP27C1Q4G0S4 372 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 SDHAF4Q5VUM1 108 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 WDR20Q8TBZ3 569 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 MCHR1Q99705 422 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 SLC6A17Q9H1V8 727 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ASH2LQ9UBL3 628 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 SEC16AO15027 2179 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 A0A1W2PPV4 95 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 MANBAO00462 879 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 KCNK2O95069 426 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 GGT5P36269 586 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 PSMD8P48556 350 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 OR5D16Q8NGK9 328 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 NOX3Q9HBY0 568 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 CEPT1Q9Y6K0 416 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 SPATA31C1P0DKV0 1188 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 NR0B1P51843 470 aaKnown RBP14.57□□□□□ -0.08
COL5A1-201ENST00000371817 FXYD4P59646 89 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 OGDHQ02218 1023 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 PHYHD1Q5SRE7 291 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 OR5AK2Q8NH90 309 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 SNX18Q96RF0 628 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 LMF1Q96S06 567 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 NFS1Q9Y697 457 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 MT-ND4P03905 459 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ALPIP09923 528 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 GPR33Q49SQ1 333 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 LCN10Q6JVE6 187 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 CD163Q86VB7 1156 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 GBA2Q9HCG7 927 aaPredicted RBP14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ARHGAP19Q14CB8 494 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ECM1Q16610 540 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ZNF678Q5SXM1 525 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 PXDC1Q5TGL8 231 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 SLC38A3Q99624 504 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 UGT2A1Q9Y4X1 527 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 CIDEAO60543 219 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 AOC2O75106 756 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 OPCMLQ14982 345 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 BCL7AQ4VC05 210 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 BLOC1S3Q6QNY0 202 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ZNF596Q8TC21 504 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 FCRL5Q96RD9 977 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 MRM3Q9HC36 420 aaKnown RBP14.57□□□□□ -0.08
COL5A1-201ENST00000371817 TMEM235A6NFC5 223 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ADRB1P08588 477 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 RD3LP0DJH9 198 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 NDUFV2P19404 249 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 VIPR1P32241 457 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 THBS3P49746 956 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 SLC18B1Q6NT16 456 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 METTL2BQ6P1Q9 378 aaKnown RBP14.57□□□□□ -0.08
COL5A1-201ENST00000371817 SYNPRQ8TBG9 265 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 PXYLP1Q8TE99 480 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ZBTB8AQ96BR9 441 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 METTL2AQ96IZ6 378 aaKnown RBP14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ALG8Q9BVK2 526 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ACKR4Q9NPB9 350 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 NAALAD2Q9Y3Q0 740 aa14.57□□□□□ -0.08
COL5A1-201ENST00000371817 ANKRD34BA5PLL1 514 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 TACR2P21452 398 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 TAF10Q12962 218 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 TNK1Q13470 666 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 THOC6Q86W42 341 aaKnown RBP14.56□□□□□ -0.08
COL5A1-201ENST00000371817 CILP2Q8IUL8 1156 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 OR5W2Q8NH69 310 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 IL12RB2Q99665 862 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ARPC5LQ9BPX5 153 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 FTHL17Q9BXU8 183 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 KLRF1Q9NZS2 232 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 MRPS34P82930 218 aaKnown RBP14.56□□□□□ -0.08
COL5A1-201ENST00000371817 RBMS3Q6XE24 437 aaKnown RBP14.56□□□□□ -0.08
COL5A1-201ENST00000371817 SFXN5Q8TD22 340 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 C2CD4CQ8TF44 421 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 CD244Q9BZW8 370 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 NOCTQ9UK39 431 aaKnown RBP14.56□□□□□ -0.08
COL5A1-201ENST00000371817 POMT1Q9Y6A1 747 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 SEC14L6B5MCN3 397 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 LOC730098B7Z3J9 87 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ZBTB7AO95365 584 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 AHSGP02765 367 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 ZNF74Q16587 644 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 HACD2Q6Y1H2 254 aa14.56□□□□□ -0.08
COL5A1-201ENST00000371817 SULF2Q8IWU5 870 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms