RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 SCG5P05408 212 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 RPS3AP61247 264 aaKnown RBP27.17■■□□□ 1.94
SSBP3-204ENST00000371320 ENTPD8Q5MY95 495 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 TPRG1LQ5T0D9 272 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 VRK2Q86Y07 508 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 FAM26EQ8N5C1 309 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 NT5CQ8TCD5 201 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 ZG16BQ96DA0 208 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 ACTRT3Q9BYD9 372 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 LSM2Q9Y333 95 aaKnown RBP27.17■■□□□ 1.94
SSBP3-204ENST00000371320 GSTM3P21266 225 aa27.16■■□□□ 1.94
SSBP3-204ENST00000371320 S100A5P33763 92 aa27.16■■□□□ 1.94
SSBP3-204ENST00000371320 KHDRBS1Q07666 443 aaKnown RBP eCLIP27.16■■□□□ 1.94
SSBP3-204ENST00000371320 INAVAQ3KP66 663 aa27.16■■□□□ 1.94
SSBP3-204ENST00000371320 TRIM73Q86UV7 250 aa27.16■■□□□ 1.94
SSBP3-204ENST00000371320 CACTIN-AS1Q8N1I8 211 aa27.16■■□□□ 1.94
SSBP3-204ENST00000371320 PRR14Q9BWN1 585 aa27.16■■□□□ 1.94
SSBP3-204ENST00000371320 TRNAU1APQ9NX07 287 aaKnown RBP27.16■■□□□ 1.94
SSBP3-204ENST00000371320 GIN1Q9NXP7 522 aa27.16■■□□□ 1.94
SSBP3-204ENST00000371320 KRBA1A5PL33 1030 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 SLC35G6P0C7Q6 338 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 ACADMP11310 421 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 TGM1P22735 817 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 CTHP32929 405 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 SPHARQ15513 63 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 FBXO42Q6P3S6 717 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 PLEKHG7Q6ZR37 379 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 USP30Q70CQ3 517 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 CYP4Z2PQ8N1L4 340 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 ARHGDIGQ99819 225 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 MND1Q9BWT6 205 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 TMEM168Q9H0V1 697 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 PCOLCE2Q9UKZ9 415 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 GIMAP1-GIMAP5A0A087WTJ2 511 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 DNASE1L3Q13609 305 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 ACSM5Q6NUN0 579 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 GIMAP5Q96F15 307 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 C10orf90Q96M02 699 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 S1PR5Q9H228 398 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 CD93Q9NPY3 652 aa27.15■■□□□ 1.94
SSBP3-204ENST00000371320 A0A087WUU8 490 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 FRS3O43559 492 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 CSO75390 466 aaKnown RBP27.14■■□□□ 1.94
SSBP3-204ENST00000371320 CYP7B1O75881 506 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 APBB3O95704 486 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 ALOX5P09917 674 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 CPN2P22792 545 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 SOX6P35712 828 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 CDK5Q00535 292 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 KIR2DS3Q14952 304 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 PRRT3Q5FWE3 981 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 SLC25A30Q5SVS4 291 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 C6orf132Q5T0Z8 1188 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 LRRC25Q8N386 305 aaPredicted RBP27.14■■□□□ 1.94
SSBP3-204ENST00000371320 ADAMTS15Q8TE58 950 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 NR4A3Q92570 626 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 BMFQ96LC9 184 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 RACGAP1Q9H0H5 632 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 C6orf106Q9H6K1 298 aaPredicted RBP27.14■■□□□ 1.94
SSBP3-204ENST00000371320 SLC28A3Q9HAS3 691 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 HHATLQ9HCP6 504 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 MKLN1Q9UL63 735 aa27.14■■□□□ 1.94
SSBP3-204ENST00000371320 GPR55Q9Y2T6 319 aaPredicted RBP27.14■■□□□ 1.94
SSBP3-204ENST00000371320 TICRRQ7Z2Z1 1910 aa27.14■■□□□ 1.93
SSBP3-204ENST00000371320 RASGRP1O95267 797 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 MAGP20916 626 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 SMSP52788 366 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 TNFRSF17Q02223 184 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 COL26A1Q96A83 441 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 LRR1Q96L50 414 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 NEURL2Q9BR09 285 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 CLEC1BQ9P126 229 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 MSRAQ9UJ68 235 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 CFL2Q9Y281 166 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 F5P12259 2224 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 GPX5O75715 221 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 UPK1BO75841 260 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 IFNGR2P38484 337 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 SOX3P41225 446 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 CD97P48960 835 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 SNRPNP63162 240 aaKnown RBP27.13■■□□□ 1.93
SSBP3-204ENST00000371320 SYT14P1Q58G82 188 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 RNLSQ5VYX0 342 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 KIAA1324Q6UXG2 1013 aaKnown RBP27.13■■□□□ 1.93
SSBP3-204ENST00000371320 MEX3DQ86XN8 651 aaKnown RBP27.13■■□□□ 1.93
SSBP3-204ENST00000371320 GJD3Q8N144 294 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 NANOGP1Q8N7R0 232 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 FLVCR1-AS1Q8TAF5 88 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 ZCCHC10Q8TBK6 192 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 GNPDA2Q8TDQ7 276 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 SLC35A4Q96G79 324 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 PHF11Q9UIL8 331 aa27.13■■□□□ 1.93
SSBP3-204ENST00000371320 XIRP2A4UGR9 3374 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 SAGE2PA6NJ88 616 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 CPSF4LA6NMK7 179 aaKnown RBP27.12■■□□□ 1.93
SSBP3-204ENST00000371320 SUZ12Q15022 739 aaKnown RBP27.12■■□□□ 1.93
SSBP3-204ENST00000371320 TRAM2Q15035 370 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 SNAPC1Q16533 368 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 TRIM69Q86WT6 500 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 KIF18BQ86Y91 864 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms