RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 TMEM205Q6UW68 189 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 OR4N4Q8N0Y3 316 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 TMEM168Q9H0V1 697 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 BRF2Q9HAW0 419 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 EPHA6Q9UF33 1036 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 CLEC4EQ9ULY5 219 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 FOSL2P15408 326 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 GSTM4Q03013 218 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 DEFB134Q4QY38 66 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 METTL11BQ5VVY1 283 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 OR4C11Q6IEV9 310 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 CRTC1Q6UUV9 634 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 CPOQ8IVL8 374 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 ZNF565Q8N9K5 539 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 GALNT11Q8NCW6 608 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 OR52E2Q8NGJ4 325 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 GRPRP30550 384 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 CASP3P42574 277 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 FAM180BQ6P0A1 224 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 APCDD1Q8J025 514 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 EMC3Q9P0I2 261 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 NRXN3Q9Y4C0 1643 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 A0A0G2JMP0 313 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 C11orf98E9PRG8 122 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 ARPC5O15511 151 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 PFKLP17858 780 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 ELP2Q6IA86 826 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 FRMPD2BQ6IN97 320 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 ERN2Q76MJ5 926 aaKnown RBP16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 OR4M2Q8NGB6 313 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 THAP7Q9BT49 309 aaPredicted RBP16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 DPH7Q9BTV6 452 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 G6PC3Q9BUM1 346 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 ALG8Q9BVK2 526 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 RGCCQ9H4X1 137 aa16.28■□□□□ 0.2
PTP4A1-201ENST00000370651 TNFRSF10BO14763 440 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 SMIM18P0DKX4 95 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 POLR2CP19387 275 aaPredicted RBP16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 POLR2IP36954 125 aaKnown RBP16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 PTH2RP49190 550 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 ZNF140P52738 457 aaPredicted RBP16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 GRSF1Q12849 480 aaKnown RBP eCLIP16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 MLIPQ5VWP3 458 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 MDGA1Q8NFP4 955 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 UBXN10Q96LJ8 280 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 USP22Q9UPT9 525 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 TNFP01375 233 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 ACRP10323 421 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 GABRB3P28472 473 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 GDI2P50395 445 aaKnown RBP16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 HERV-K104P61576 105 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 MAMDC4Q6UXC1 1216 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 CPNE2Q96FN4 548 aaPredicted RBP16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 IGSF21Q96ID5 467 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 SAMD8Q96LT4 415 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 CNIH4Q9P003 139 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 WASH4PA8MWX3 477 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 LATS1O95835 1130 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 MAS1P04201 325 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 PRKCAP17252 672 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 EVI2BP34910 448 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 PRRT3Q5FWE3 981 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 RNASE10Q5GAN6 216 aaKnown RBP16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 GATSQ8NAP1 163 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 MFSD8Q8NHS3 518 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 CIDECQ96AQ7 238 aaPredicted RBP16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 SLC41A3Q96GZ6 507 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 KCNIP3Q9Y2W7 256 aa16.27■□□□□ 0.2
PTP4A1-201ENST00000370651 CCDC88AQ3V6T2 1871 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 SC5DO75845 299 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 ACTBP60709 375 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 ACTG1P63261 375 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 RAB40BQ12829 278 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 TATDN3Q17R31 274 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 WDR45BQ5MNZ6 344 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 NRARPQ7Z6K4 114 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 OR4K13Q8NH42 304 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 CMKLR1Q99788 373 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 C11orf84Q9BUA3 381 aaPredicted RBP16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 OR8D2Q9GZM6 311 aa16.27■□□□□ 0.19
PTP4A1-201ENST00000370651 RGPD1P0DJD0 1748 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 AK1P00568 194 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 ARSAP15289 507 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 MAP4K2Q12851 820 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 GRIN2CQ14957 1233 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 HES5Q5TA89 166 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 NECAB3Q96P71 396 aaPredicted RBP16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 POLMQ9NP87 494 aaPredicted RBP16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 POT1Q9NUX5 634 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 C5AR2Q9P296 337 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 TRAPPC13A5PLN9 417 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 DPP6P42658 865 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 TLE2Q04725 743 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 AMZ1Q400G9 498 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 IFNL1Q8IU54 200 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 OR6N1Q8NGY5 312 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 SPHK2Q9NRA0 654 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 LOC102723532A0A0G2JNH3 316 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 A0A0U1RQS6 177 aa16.26■□□□□ 0.19
PTP4A1-201ENST00000370651 PRAF2O60831 178 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms