RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 PDLIM5Q96HC4 596 aaKnown RBP13.1□□□□□ -0.31
VAMP4-202ENST00000367740 OR10A5Q9H207 317 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 GPRC5BQ9NZH0 403 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 EHD3Q9NZN3 535 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 REXO2Q9Y3B8 237 aaKnown RBP13.1□□□□□ -0.31
VAMP4-202ENST00000367740 GLOD5A6NK44 160 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 SDR42E2A6NKP2 422 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 SEC14L5O43304 696 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 KIAA0513O60268 411 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 USF1P22415 310 aaPredicted RBP13.09□□□□□ -0.31
VAMP4-202ENST00000367740 MAGEA6P43360 314 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 COMPP49747 757 aaPredicted RBP13.09□□□□□ -0.31
VAMP4-202ENST00000367740 NEK2P51955 445 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 DEFA6Q01524 100 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 HMGCS1Q01581 520 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 BSPH1Q075Z2 132 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 DOC2AQ14183 400 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 TMEM35AQ53FP2 167 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 SEL1L2Q5TEA6 688 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 SEZ6L2Q6UXD5 910 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 GALNT12Q8IXK2 581 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 C10orf105Q8TEF2 133 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 FAM168AQ92567 244 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 WDR34Q96EX3 536 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 PTCD3Q96EY7 689 aaKnown RBP13.09□□□□□ -0.31
VAMP4-202ENST00000367740 ADAD1Q96M93 576 aaKnown RBP13.09□□□□□ -0.31
VAMP4-202ENST00000367740 CACNG6Q9BXT2 260 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 PLCE1Q9P212 2302 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 PHF11Q9UIL8 331 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 GPR52Q9Y2T5 361 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 EMC9Q9Y3B6 208 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 OARD1Q9Y530 152 aa13.09□□□□□ -0.31
VAMP4-202ENST00000367740 UQCRHLA0A096LP55 91 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 SYCE3A1L190 88 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 EFCAB8A8MWE9 144 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 GOLGA6L22H0YM25 854 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 AHSGP02765 367 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 SLC35E2BP0CK96 405 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 SLC35E2P0CK97 266 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
VAMP4-202ENST00000367740 CLDN20P56880 219 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 EEFSECP57772 596 aaKnown RBP13.08□□□□□ -0.32
VAMP4-202ENST00000367740 SARNPP82979 210 aaKnown RBP13.08□□□□□ -0.32
VAMP4-202ENST00000367740 PLCXD2Q0VAA5 305 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 KIF5AQ12840 1032 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 OR5M10Q6IEU7 315 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 OR4C11Q6IEV9 310 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 C11orf71Q6IPW1 123 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 DRICH1Q6PGQ1 229 aaPredicted RBP13.08□□□□□ -0.32
VAMP4-202ENST00000367740 GSTA5Q7RTV2 222 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 PROX1Q92786 737 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 TMEM79Q9BSE2 394 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 EFCAB11Q9BUY7 163 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 CAPS2Q9BXY5 557 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 FAIMQ9NVQ4 179 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 CISD1Q9NZ45 108 aaKnown RBP13.08□□□□□ -0.32
VAMP4-202ENST00000367740 CLEC4AQ9UMR7 237 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 NOTCH1P46531 2555 aa13.08□□□□□ -0.32
VAMP4-202ENST00000367740 VWFP04275 2813 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 C17orf51A8MQB3 221 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 CLGNO14967 610 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 RAMP1O60894 148 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-202ENST00000367740 TGFB1P01137 390 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 NUDT7P0C024 238 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 FCGR2AP12318 317 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 MLNP12872 115 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 ZNF37AP17032 561 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-202ENST00000367740 BUD31P41223 144 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-202ENST00000367740 TAB1Q15750 504 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 CCNG2Q16589 344 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 KHDRBS2Q5VWX1 349 aaKnown RBP13.07□□□□□ -0.32
VAMP4-202ENST00000367740 BEND4Q6ZU67 534 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 SYCE1Q8N0S2 351 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 ZNF619Q8N2I2 560 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 C3orf56Q8N813 242 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 DTNBP1Q96EV8 351 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 ITPAQ9BY32 194 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 FANCFQ9NPI8 374 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 SLC17A6Q9P2U8 582 aa13.07□□□□□ -0.32
VAMP4-202ENST00000367740 PCNX3Q9H6A9 2034 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 A0A1W2PR48 441 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 DPRXA6NFQ7 191 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 SHISA9B4DS77 424 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 GOLGA8MH3BSY2 632 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 VENTXO95231 258 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 FESP07332 822 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 NR2F6P10588 404 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 IL11P20809 199 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 S1PR1P21453 382 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 ADH6P28332 368 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 DEKP35659 375 aaKnown RBP13.06□□□□□ -0.32
VAMP4-202ENST00000367740 CASP2P42575 452 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 MAGEA3P43357 314 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 SLC6A8P48029 635 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 KCNJ1P48048 391 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 C21orf58P58505 322 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 TSC22D1Q15714 1073 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 CR1LQ2VPA4 569 aa13.06□□□□□ -0.32
VAMP4-202ENST00000367740 FBXO48Q5FWF7 155 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms