RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 FBXW5Q969U6 566 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 ESAMQ96AP7 390 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 SFXN2Q96NB2 322 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 TMEM79Q9BSE2 394 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 TBCDQ9BTW9 1192 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 OSBPL11Q9BXB4 747 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 TRIM2Q9C040 744 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 CHODLQ9H9P2 273 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 CXorf21Q9HAI6 301 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 PLAC1Q9HBJ0 212 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 MOCS1Q9NZB8 636 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 CLEC4AQ9UMR7 237 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 PROCRQ9UNN8 238 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 RNF115Q9Y4L5 304 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 DYSFO75923 2080 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 A0A1W2PR48 441 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 DPRXA6NFQ7 191 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 ANKDD1BA6NHY2 528 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 ADARB2-AS1A8MUL3 147 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 CAPN14A8MX76 684 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 MIF4GDA9UHW6 222 aaKnown RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 GOLGA6L19H0YKK7 550 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 GOLGA8MH3BSY2 632 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 AP3B1O00203 1094 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 DYRK3O43781 588 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 H2AFYO75367 372 aaKnown RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 EEDO75530 441 aaKnown RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 CBR3O75828 277 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 NTN1O95631 604 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 GPR75O95800 540 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 TGFB1P01137 390 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 ENO2P09104 434 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 CCDC175P0C221 793 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 RHOXF2BP0C7M4 288 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 GPX3P22352 226 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 SRD5A2P31213 254 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 MAGEA3P43357 314 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 MAGEA6P43360 314 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 VPS41P49754 854 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 IDH3AP50213 366 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 CDK16Q00536 496 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 HMGCS1Q01581 520 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 TNFRSF17Q02223 184 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 SLAMF1Q13291 335 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 ZNF460Q14592 562 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 PON3Q15166 354 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 SPA17Q15506 151 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 OCLNQ16625 522 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 C11orf91Q3C1V1 193 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 SLC30A6Q6NXT4 461 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 TMEM81Q6P7N7 255 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 RAD9BQ6WBX8 426 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 DNAJC14Q6Y2X3 702 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 FAM214BQ7L5A3 538 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 DTX2Q86UW9 622 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 CNGA4Q8IV77 575 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 ZNF619Q8N2I2 560 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 OR5M1Q8NGP8 315 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 ZNF473Q8WTR7 871 aaKnown RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 S100PBPQ96BU1 408 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 RHBDF1Q96CC6 855 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 REPS1Q96D71 796 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 MSI2Q96DH6 328 aaKnown RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 WDR34Q96EX3 536 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 PDLIM5Q96HC4 596 aaKnown RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 SIGLEC10Q96LC7 697 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 HS6ST2Q96MM7 605 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 SERPINB12Q96P63 405 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 SOX7Q9BT81 388 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 PINK1Q9BXM7 581 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 ZNF717Q9BY31 904 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 TRIM54Q9BYV2 358 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 FRMD8P1Q9BZ68 369 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 TSGA10Q9BZW7 698 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 OR51B5Q9H339 312 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 ACTR8Q9H981 624 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 PLSCR4Q9NRQ2 329 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 ASB4Q9Y574 426 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 MAD1L1Q9Y6D9 718 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 EPN1Q9Y6I3 576 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 CAPN6Q9Y6Q1 641 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 CADP27708 2225 aa7.58□□□□□ -1.2
HMGB1P39-201ENST00000366304 A0A1W2PP18 115 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 PRAMEF25A6NGN4 478 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 PGRMC2O15173 223 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 TMPRSS11DO60235 418 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 NME6O75414 186 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 BANF1O75531 89 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 LY6HO94772 140 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 VENTXO95231 258 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 PPP3CBP16298 524 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 GSTM2P28161 218 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 GAS1P54826 345 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 BSPH1Q075Z2 132 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 MGAT2Q10469 447 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 KIF5AQ12840 1032 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 BCL2A1Q16548 175 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 C11orf71Q6IPW1 123 aa7.57□□□□□ -1.2
HMGB1P39-201ENST00000366304 AAGABQ6PD74 315 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms