RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PACS2Q86VP3 889 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SAMD14Q8IZD0 417 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 OMA1Q96E52 524 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 VSTM2LQ96N03 204 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SHCBP1LQ9BZQ2 653 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 C12orf65Q9H3J6 166 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 EXO5Q9H790 373 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ANKRA2Q9H9E1 313 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PPCSQ9HAB8 311 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 MCCC2Q9HCC0 563 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SLC35C2Q9NQQ7 365 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 OXSMQ9NWU1 459 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TAS2R7Q9NYW3 318 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GRID1Q9ULK0 1009 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 EXO1Q9UQ84 846 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GNG14A0A1W2PPG7 69 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CCDC151A5D8V7 595 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 OR6C70A6NIJ9 312 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 MYO1GB0I1T2 1018 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 KDM4EB2RXH2 506 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NPIPB8E9PQR5 432 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 H3BQF6 201 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 EPPINO95925 133 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ANXA4P09525 319 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DDCP20711 480 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CAPN3P20807 821 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CEACAM8P31997 349 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CCT5P48643 541 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DLX5P56178 289 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 KIAA0040Q15053 153 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 FAM71E1Q6IPT2 247 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CCNYL1Q8N7R7 359 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 WDSUB1Q8N9V3 476 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 OR10Q1Q8NGQ4 319 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 OR9A2Q8NGT5 310 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 FAM76AQ8TAV0 307 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 RDH11Q8TC12 318 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 EXOSC8Q96B26 276 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SLC35A4Q96G79 324 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 EBPLQ9BY08 206 aa12.48□□□□□ -0.41
TNFRSF1A-202ENST00000366159 INTS1Q8N201 2190 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 FAM47E-STBD1D6RA91 191 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SNPHO15079 494 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TSPAN2O60636 221 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 BMP7P18075 431 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 KRT15P19012 456 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PRPH2P23942 346 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TIMP3P35625 211 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SLCO1A2P46721 670 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TLE4Q04727 773 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 BTKQ06187 659 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ZNF763Q0D2J5 394 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PLCXD2Q0VAA5 305 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SLC25A35Q3KQZ1 300 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ACSF3Q4G176 576 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 EIPR1Q53HC9 387 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DCST1Q5T197 706 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NPSR1Q6W5P4 371 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 LIX1Q8N485 282 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NAXEQ8NCW5 288 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 FAM83FQ8NEG4 500 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 OR7G2Q8NG99 324 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 OR1J4Q8NGS1 313 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 EPS8L3Q8TE67 593 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 KAT2AQ92830 837 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 WDYHV1Q96HA8 205 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 UGT2B28Q9BY64 529 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 METTL7AQ9H8H3 244 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ANKZF1Q9H8Y5 726 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GALNT9Q9HCQ5 603 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ALKBH4Q9NXW9 302 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 WBP11Q9Y2W2 641 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SLC6A5Q9Y345 797 aa12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TEP1Q99973 2627 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-202ENST00000366159 HIVEP1P15822 2718 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 C15orf38-AP3S2A0A0A6YYH1 394 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 C2orf72A6NCS6 295 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 B4DXG7 233 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PLOD2O00469 737 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GNB5O14775 395 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NME6O75414 186 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TRAPPC6AO75865 159 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 RSL1D1O76021 490 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PSMG1O95456 288 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CPA3P15088 417 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 KRT4P19013 534 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 POU3F2P20265 443 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 MPIP34949 423 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 MASP1P48740 699 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GAS1P54826 345 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CORO7P57737 925 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NSUN5P2Q63ZY6 315 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 RNF165Q6ZSG1 346 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PM20D2Q8IYS1 436 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 UBLCP1Q8WVY7 318 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TMBIM1Q969X1 311 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 METTL2AQ96IZ6 378 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 COL21A1Q96P44 957 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 OSBPL11Q9BXB4 747 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms