RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 TPT1P8Q9HAU6 139 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 MYOTQ9UBF9 498 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 TAGLN3Q9UI15 199 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 MAP1BP46821 2468 aaKnown RBP13.77□□□□□ -0.21
CCNE1-202ENST00000357943 FXYD1O00168 92 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 WWP2O00308 870 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 ZNF354AO60765 605 aaPredicted RBP13.76□□□□□ -0.21
CCNE1-202ENST00000357943 UNC5CO95185 931 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 CT45A8P0DMV1 189 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 CT45A9P0DMV2 189 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 MATN1P21941 496 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 MAP3K8P41279 467 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 ST13P50502 369 aaKnown RBP13.76□□□□□ -0.21
CCNE1-202ENST00000357943 NR0B1P51843 470 aaKnown RBP13.76□□□□□ -0.21
CCNE1-202ENST00000357943 TBR1Q16650 682 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 TRMT5Q32P41 509 aaKnown RBP13.76□□□□□ -0.21
CCNE1-202ENST00000357943 CT45A2Q5DJT8 189 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 NPSR1Q6W5P4 371 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 CCDC121Q6ZUS5 278 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 RPS19BP1Q86WX3 136 aaKnown RBP13.76□□□□□ -0.21
CCNE1-202ENST00000357943 RNF130Q86XS8 419 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 SLC5A8Q8N695 610 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 SLC16A11Q8NCK7 471 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 OR5D16Q8NGK9 328 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 OR5L2Q8NGL0 311 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 DNAJB8Q8NHS0 232 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 SLC9A6Q92581 669 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 JADE3Q92613 823 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 LRRC58Q96CX6 371 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 CGREF1Q99674 301 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 NXF5Q9H1B4 397 aaKnown RBP13.76□□□□□ -0.21
CCNE1-202ENST00000357943 IKZF5Q9H5V7 419 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 ZNF552Q9H707 407 aaPredicted RBP13.76□□□□□ -0.21
CCNE1-202ENST00000357943 EFCAB1Q9HAE3 211 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 GPR83Q9NYM4 423 aa13.76□□□□□ -0.21
CCNE1-202ENST00000357943 GPR55Q9Y2T6 319 aaPredicted RBP13.76□□□□□ -0.21
CCNE1-202ENST00000357943 CLIC1O00299 241 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 OR2J2O76002 312 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 UBOX5O94941 541 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 T-ENOLP0DO92 83 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 ACP2P11117 423 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 PPICP45877 212 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 NUDT2P50583 147 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 MVDP53602 400 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 RUNDC3AQ59EK9 446 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 COX20Q5RI15 118 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 EXOSC6Q5RKV6 272 aaKnown RBP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 HLA-DQA1Q5Y7H0 255 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 C19orf48Q6RUI8 117 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 CDRT4Q8N9R6 151 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 OR4N2Q8NGD1 307 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 HOXB13Q92826 284 aaPredicted RBP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 LCORQ96JN0 433 aaPredicted RBP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 SLC35G5Q96KT7 338 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 ANKRD27Q96NW4 1050 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 BTBD9Q96Q07 612 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 LMF1Q96S06 567 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 LMF2Q9BU23 707 aaKnown RBP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 ACTRT3Q9BYD9 372 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 PRORYQ9H606 182 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 FAF1Q9UNN5 650 aaPredicted RBP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 ITGA10O75578 1167 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 CEACAM4O75871 244 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 ESRRAP11474 423 aaPredicted RBP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 SOX11P35716 441 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 MAN2A2P49641 1150 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 PRIM2P49643 509 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 MLF1P58340 268 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 MTPNP58546 118 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 SELPLGQ14242 412 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 DUSP5Q16690 384 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 ST3GAL2Q16842 350 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 ACER2Q5QJU3 275 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 IRAK1BP1Q5VVH5 260 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 CDC73Q6P1J9 531 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 TNFAIP8L2Q6P589 184 aaPredicted RBP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 ZCCHC12Q6PEW1 402 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 SLC44A2Q8IWA5 706 aaPredicted RBP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 ARMC10Q8N2F6 343 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 C10orf111Q8N326 155 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 C17orf47Q8NEP4 570 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 FBXO27Q8NI29 283 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 PIK3R3Q92569 461 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 TP53INP1Q96A56 240 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 NSL1Q96IY1 281 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 RASL10BQ96S79 203 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 OR51I1Q9H343 314 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 ZBTB20Q9HC78 741 aaPredicted RBP13.75□□□□□ -0.21
CCNE1-202ENST00000357943 GID8Q9NWU2 228 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 KCNE3Q9Y6H6 103 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 NBEAQ8NFP9 2946 aa13.75□□□□□ -0.21
CCNE1-202ENST00000357943 FRG2CA6NGY1 282 aa13.74□□□□□ -0.21
CCNE1-202ENST00000357943 NKX2-2O95096 273 aa13.74□□□□□ -0.21
CCNE1-202ENST00000357943 NADKO95544 446 aaPredicted RBP13.74□□□□□ -0.21
CCNE1-202ENST00000357943 KRT75O95678 551 aa13.74□□□□□ -0.21
CCNE1-202ENST00000357943 NPPAP01160 153 aa13.74□□□□□ -0.21
CCNE1-202ENST00000357943 DRD5P21918 477 aa13.74□□□□□ -0.21
CCNE1-202ENST00000357943 GABRA3P34903 492 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms