RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 PRSS55Q6UWB4 352 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-205ENST00000357568 CMIPQ8IY22 773 aa10.06□□□□□ -0.8
CAPN3-205ENST00000357568 DTX3Q8N9I9 347 aa10.06□□□□□ -0.8
CAPN3-205ENST00000357568 ATAD1Q8NBU5 361 aa10.06□□□□□ -0.8
CAPN3-205ENST00000357568 OR56A3Q8NH54 315 aa10.06□□□□□ -0.8
CAPN3-205ENST00000357568 LRR1Q96L50 414 aa10.06□□□□□ -0.8
CAPN3-205ENST00000357568 ZNF354BQ96LW1 612 aa10.06□□□□□ -0.8
CAPN3-205ENST00000357568 GAS2L1Q99501 681 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-205ENST00000357568 MTERF1Q99551 399 aaKnown RBP10.06□□□□□ -0.8
CAPN3-205ENST00000357568 AFF4Q9UHB7 1163 aaKnown RBP10.06□□□□□ -0.8
CAPN3-205ENST00000357568 DPP7Q9UHL4 492 aa10.06□□□□□ -0.8
CAPN3-205ENST00000357568 SCP2D1Q9UJQ7 156 aa10.06□□□□□ -0.8
CAPN3-205ENST00000357568 MAB21L2Q9Y586 359 aa10.06□□□□□ -0.8
CAPN3-205ENST00000357568 CACNG2Q9Y698 323 aa10.06□□□□□ -0.8
CAPN3-205ENST00000357568 GNG14A0A1W2PPG7 69 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 SLC38A8A6NNN8 435 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 TLX2O43763 284 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-205ENST00000357568 PSIP1O75475 530 aaKnown RBP10.05□□□□□ -0.8
CAPN3-205ENST00000357568 ITGA10O75578 1167 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 WDPCPO95876 746 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 SOX9P48436 509 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 KCNJ5P48544 419 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 GRIN2CQ14957 1233 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 STK11Q15831 433 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 ZNF284Q2VY69 593 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 LEXMQ3ZCV2 418 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 HECTD3Q5T447 861 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 TPRG1Q6ZUI0 275 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 DENND1CQ8IV53 801 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 SYT14Q8NB59 555 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 POGLUT1Q8NBL1 392 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 OR11H7Q8NGC8 314 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 ADAMTS14Q8WXS8 1223 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 NXPE2Q96DL1 559 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 NEURL3Q96EH8 262 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 OTUB1Q96FW1 271 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-205ENST00000357568 TOE1Q96GM8 510 aaKnown RBP10.05□□□□□ -0.8
CAPN3-205ENST00000357568 SENP5Q96HI0 755 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-205ENST00000357568 NECTIN4Q96NY8 510 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 GFM1Q96RP9 751 aaKnown RBP10.05□□□□□ -0.8
CAPN3-205ENST00000357568 ACTR6Q9GZN1 396 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 RNF32Q9H0A6 362 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 BTBD1Q9H0C5 482 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 OR51J1Q9H342 316 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 TVP23BQ9NYZ1 205 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 E7EQ34 232 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 LZTS3O60299 673 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-205ENST00000357568 KCNJ13O60928 360 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 STC2O76061 302 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 ABLIM3O94929 683 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 SLCO2B1O94956 709 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 ETHE1O95571 254 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 SULT1A3P0DMM9 295 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 SULT1A4P0DMN0 295 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 AHCYP23526 432 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 EXOSC2Q13868 293 aaKnown RBP10.05□□□□□ -0.8
CAPN3-205ENST00000357568 HBMQ6B0K9 141 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 C1orf94Q6P1W5 598 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 MED27Q6P2C8 311 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 TMIGD1Q6UXZ0 262 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 RTL4Q6ZR62 310 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 ADGRD2Q7Z7M1 963 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 RNF175Q8N4F7 328 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 TTC9BQ8N6N2 239 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 UXS1Q8NBZ7 420 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 GPR32P1Q8NGA4 272 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 NEIL3Q8TAT5 605 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 RBPMSQ93062 196 aaKnown RBP10.05□□□□□ -0.8
CAPN3-205ENST00000357568 TMEM203Q969S6 136 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 PHF21AQ96BD5 680 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 RNFT2Q96EX2 444 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 B3GALT6Q96L58 329 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 NLNQ9BYT8 704 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 GSX2Q9BZM3 304 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 IL20Q9NYY1 176 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 LIPT1Q9Y234 373 aa10.05□□□□□ -0.8
CAPN3-205ENST00000357568 MTCL1Q9Y4B5 1905 aaKnown RBP10.05□□□□□ -0.8
CAPN3-205ENST00000357568 C5orf58C9J3I9 102 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 NDUFA2O43678 99 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 SOX14O95416 240 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 LIMS3P0CW19 117 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 LIMS4P0CW20 117 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 CORO1AP31146 461 aaKnown RBP10.04□□□□□ -0.8
CAPN3-205ENST00000357568 BTCP35070 178 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 FEN1P39748 380 aaKnown RBP10.04□□□□□ -0.8
CAPN3-205ENST00000357568 AVPR1BP47901 424 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 SGSHP51688 502 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 DHODHQ02127 395 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 GINS1Q14691 196 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 PYHIN1Q6K0P9 492 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 RETSATQ6NUM9 610 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 LINGO4Q6UY18 593 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 PLEKHM3Q6ZWE6 761 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 MARCH9Q86YJ5 346 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 GPR26Q8NDV2 337 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 TTC16Q8NEE8 873 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 RFKQ969G6 155 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 ALG14Q96F25 216 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 MSANTD3Q96H12 275 aa10.04□□□□□ -0.8
CAPN3-205ENST00000357568 ZNF764Q96H86 408 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms