RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 DPEP3Q9H4B8 488 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 EXTL2Q9UBQ6 330 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SCAMP2O15127 329 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 DFFBO76075 338 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TGFB1P01137 390 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CTSEP14091 401 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 GCGRP47871 477 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 MRPL19P49406 292 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SPANXN4Q5MJ08 99 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 GPR148Q8TDV2 347 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 LYRM2Q9NU23 88 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TUBGCP6Q96RT7 1819 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 A0A0A6YYH2 397 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 A6NIZ1 184 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 A6NJ64 397 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 BOLA2-SMG1P6H3BVE0 249 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 RAP1BP61224 184 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 RAP1AP62834 184 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SLAMF1Q13291 335 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 KIAA0907Q7Z7F0 614 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM145Q8NBT3 493 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CA5BQ9Y2D0 317 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM212A6NML5 194 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 NPIPA5E9PKD4 350 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 DUSP11O75319 330 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SYPP08247 313 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 PRKCAP17252 672 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 NR0B1P51843 470 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 METTL4Q8N3J2 472 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 ARNT2Q9HBZ2 717 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 NPIPA1Q9UND3 350 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 MOXD2PA6NHM9 499 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 AHSGP02765 367 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 STT3AP46977 705 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 RNF144AP50876 292 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TAZQ16635 292 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SLC16A9Q7RTY1 509 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CEACAM19Q7Z692 300 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 UPRTQ96BW1 309 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 PHYHIPLQ96FC7 376 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SMAD5Q99717 465 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TIGARQ9NQ88 270 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 DDX4Q9NQI0 724 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 ASB6Q9NWX5 421 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TBC1D3BA6NDS4 549 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PCDH1Q08174 1060 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 LAPTM4AQ15012 233 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SOHLH1Q5JUK2 328 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 RAP1GAP2Q684P5 730 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 AGTRAPQ6RW13 159 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PIWIL3Q7Z3Z3 882 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TMED4Q7Z7H5 227 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 LMO3Q8TAP4 145 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 STT3BQ8TCJ2 826 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SLC7A6Q92536 515 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PDLIM5Q96HC4 596 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 STRA6Q9BX79 667 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 GRHPRQ9UBQ7 328 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 C19orf25Q9UFG5 118 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 RGPD1P0DJD0 1748 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PRSS44E7EML9 344 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 RGS13O14921 159 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CD3GP09693 182 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 MYCLP1P12525 358 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 IL1R2P27930 398 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 GABRB3P28472 473 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 HSD11B1P28845 292 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CES5AQ6NT32 575 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TCTE3Q8IZS6 198 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PTERQ96BW5 349 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 DHRS9Q9BPW9 319 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 GHRLQ9UBU3 117 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PPIEQ9UNP9 301 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 MRPS23Q9Y3D9 190 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TBC1D3KA0A087X1G2 549 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TBC1D3FA6NER0 549 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 OR7A17O14581 309 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 MUSKO15146 869 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 HCCSP53701 268 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 MEF2AQ02078 507 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TBC1D3GQ6DHY5 549 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 DESI1Q6ICB0 168 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 RBMS3Q6XE24 437 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM173Q86WV6 379 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 STK35Q8TDR2 534 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TM9SF4Q92544 642 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 THAP7Q9BT49 309 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 NTMT1Q9BV86 223 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 GABARAPL1Q9H0R8 117 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ATG5Q9H1Y0 275 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PIH1D1Q9NWS0 290 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CAMK2AQ9UQM7 478 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 FN1P02751 2386 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 A0A1B0GUL6 1792 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 NPIPA5A0A0B4J1W7 369 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF726A6NNF4 738 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ANKRD28O15084 1053 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 H3F3AP84243 136 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 DUSP7Q16829 419 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 C15orf39Q6ZRI6 1047 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms