RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 CDYL2Q8N8U2 506 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 GBP7Q8N8V2 638 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-204ENST00000356316 FAM83FQ8NEG4 500 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-204ENST00000356316 OR52R1Q8NGF1 315 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 NRGNQ92686 78 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 NINJ1Q92982 152 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 WDYHV1Q96HA8 205 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 COL21A1Q96P44 957 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 HBEGFQ99075 208 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 OSBPL11Q9BXB4 747 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 C1QTNF3Q9BXJ4 246 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 ITPAQ9BY32 194 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 UGT2B28Q9BY64 529 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 MAT2BQ9NZL9 334 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 SENP1Q9P0U3 644 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 FETUBQ9UGM5 382 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 MAPRE3Q9UPY8 281 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 EXO1Q9UQ84 846 aaKnown RBP9.73□□□□□ -0.85
CAPN3-204ENST00000356316 PLLPQ9Y342 182 aa9.73□□□□□ -0.85
CAPN3-204ENST00000356316 EXPH5Q8NEV8 1989 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 OR6C70A6NIJ9 312 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 EEF1E1-BLOC1S5C9J1V9 151 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 H0Y3Z8 333 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 EEF1E1O43324 174 aaKnown RBP9.72□□□□□ -0.85
CAPN3-204ENST00000356316 ERN1O75460 977 aaKnown RBP9.72□□□□□ -0.85
CAPN3-204ENST00000356316 CPN1P15169 458 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 IMPDH1P20839 514 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 ATP5F1P24539 256 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-204ENST00000356316 PTPN6P29350 595 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 IL12BP29460 328 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 MPIP34949 423 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 WNT3P56703 355 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 PPP2R2AP63151 447 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 PSPHP78330 225 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 MRPS35P82673 323 aaKnown RBP9.72□□□□□ -0.85
CAPN3-204ENST00000356316 ACSM2AQ08AH3 577 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 FBXL19-AS1Q494R0 122 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 SPIN4Q56A73 249 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 SPDYAQ5MJ70 313 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 ACSM2BQ68CK6 577 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 FAM180BQ6P0A1 224 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 TMEM81Q6P7N7 255 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 AAGABQ6PD74 315 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 SLC22A9Q8IVM8 553 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 IFT20Q8IY31 132 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 MMP21Q8N119 569 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 CNPY4Q8N129 248 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 RELL2Q8NC24 303 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-204ENST00000356316 NAXEQ8NCW5 288 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 RDH11Q8TC12 318 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 ZPLD1Q8TCW7 415 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 CTHRC1Q96CG8 243 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 ERP27Q96DN0 273 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 CNRIP1Q96F85 164 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-204ENST00000356316 BBS4Q96RK4 519 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 NODALQ96S42 347 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 TM9SF2Q99805 663 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 FOXC2Q99958 501 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 GPATCH1Q9BRR8 931 aaKnown RBP9.72□□□□□ -0.85
CAPN3-204ENST00000356316 PRR14Q9BWN1 585 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 SERHLQ9NQF3 203 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 RASSF1Q9NS23 344 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 CCM2LQ9NUG4 571 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-204ENST00000356316 EHD3Q9NZN3 535 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 ZNF639Q9UID6 485 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 MCM8Q9UJA3 840 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 DTX4Q9Y2E6 619 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 DLGAP4Q9Y2H0 992 aa9.72□□□□□ -0.85
CAPN3-204ENST00000356316 CCDC168Q8NDH2 2452 aa9.71□□□□□ -0.85
CAPN3-204ENST00000356316 A0A1B0GTL3 188 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 MBD3L4A6NDZ8 208 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-204ENST00000356316 MBD3L3A6NE82 208 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-204ENST00000356316 PRAMEF25A6NGN4 478 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 FRG2CA6NGY1 282 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 MBD3L5A6NJ08 208 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-204ENST00000356316 A6NNC1 897 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 PCDH7O60245 1069 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 UGT2B11O75310 529 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 CBX7O95931 251 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 IL18BPO95998 194 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 IL3P08700 152 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 TMIGD3P0DMS9 266 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-204ENST00000356316 EPXP11678 715 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 CD99P14209 185 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 PCSK2P16519 638 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 TACR1P25103 407 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 EMDP50402 254 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 AGFG1P52594 562 aaKnown RBP9.71□□□□□ -0.86
CAPN3-204ENST00000356316 ZNF136P52737 540 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 EEF1A1P68104 462 aaKnown RBP9.71□□□□□ -0.86
CAPN3-204ENST00000356316 MRPS22P82650 360 aaKnown RBP9.71□□□□□ -0.86
CAPN3-204ENST00000356316 SRYQ05066 204 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 BTKQ06187 659 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 EFR3AQ14156 821 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 LTB4RQ15722 352 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 UNC50Q53HI1 259 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 ZNF678Q5SXM1 525 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 EEF1A1P5Q5VTE0 462 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 TIFABQ6ZNK6 161 aa9.71□□□□□ -0.86
CAPN3-204ENST00000356316 TRMT10CQ7L0Y3 403 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms