RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 FEVQ99581 238 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 TMEM168Q9H0V1 697 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 MTHFD2LQ9H903 347 aaPredicted RBP12.55□□□□□ -0.4
SCN8A-202ENST00000355133 FBRSQ9HAH7 460 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 IL26Q9NPH9 171 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 MKS1Q9NXB0 559 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 GPR83Q9NYM4 423 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 FAM171A2A8MVW0 826 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 GNMTQ14749 295 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 UEVLDQ8IX04 471 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 TCEAL8Q8IYN2 117 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 COQ8AQ8NI60 647 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 L3HYPDHQ96EM0 354 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 TMEM68Q96MH6 324 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 C2orf42Q9NWW7 574 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 TIMM8BQ9Y5J9 83 aaPredicted RBP12.55□□□□□ -0.4
SCN8A-202ENST00000355133 SGK494L7N484 410 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 PCDH17O14917 1159 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 BRINP1O60477 761 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 DEFB103AP81534 67 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 SPHARQ15513 63 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 GTDC1Q4AE62 458 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 SHISA6Q6ZSJ9 500 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 TAS1R1Q7RTX1 841 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 IGFN1Q86VF2 1251 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 Q8N402 240 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 OR9A2Q8NGT5 310 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 SERINC2Q96SA4 455 aa12.55□□□□□ -0.4
SCN8A-202ENST00000355133 PPP1R3DO95685 299 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ERCC1P07992 297 aaPredicted RBP12.54□□□□□ -0.4
SCN8A-202ENST00000355133 TUBG1P23258 451 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 IL4RP24394 825 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF81P51508 661 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 AFF1P51825 1210 aaKnown RBP12.54□□□□□ -0.4
SCN8A-202ENST00000355133 SLC18B1Q6NT16 456 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 LRRN1Q6UXK5 716 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ACBD7Q8N6N7 88 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 BMFQ96LC9 184 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 MACROD1Q9BQ69 325 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 TRIM64BA6NI03 449 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 FMO6PO60774 539 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 HBQ1P09105 142 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF829Q3KNS6 432 aaPredicted RBP12.54□□□□□ -0.4
SCN8A-202ENST00000355133 C6orf132Q5T0Z8 1188 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 KIAA0895LQ68EN5 471 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 NAGSQ8N159 534 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 CENPSQ8N2Z9 138 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 OR51L1Q8NGJ5 315 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 CREB3L1Q96BA8 519 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 C7orf34Q96L11 122 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 PHOX2BQ99453 314 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 MAGIXQ9H6Y5 334 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 H3BML4 177 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 KIAA0355O15063 1070 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 PTGS2P35354 604 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF45Q02386 682 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 RSU1Q15404 277 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ABHD17BQ5VST6 288 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 HSD11B1LQ7Z5J1 315 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 FTMTQ8N4E7 242 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 GALNT6Q8NCL4 622 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ACVR1CQ8NER5 493 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 NETO1Q8TDF5 533 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 SORBS1Q9BX66 1292 aaKnown RBP12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ACTR10Q9NZ32 417 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 MITFO75030 526 aaPredicted RBP12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF43P17038 809 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 MAOBP27338 520 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 TMBIM6P55061 237 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 CCDC58Q4VC31 144 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 LETMD1Q6P1Q0 360 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 FAM46BQ96A09 425 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 CCNL2Q96S94 520 aaPredicted RBP12.54□□□□□ -0.4
SCN8A-202ENST00000355133 COPZ2Q9P299 210 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ZCWPW2A0A1B0GU75 182 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.54□□□□□ -0.4
SCN8A-202ENST00000355133 FTCDNL1E5RQL4 147 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 PET100P0DJ07 73 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 TBRG1Q3YBR2 411 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 C6orf89Q6UWU4 347 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 ENDOVQ8N8Q3 282 aaKnown RBP12.54□□□□□ -0.4
SCN8A-202ENST00000355133 OR4K5Q8NGD3 323 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 PTERQ96BW5 349 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 CRB3Q9BUF7 120 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 NALCNQ8IZF0 1738 aa12.54□□□□□ -0.4
SCN8A-202ENST00000355133 TRAPPC13A5PLN9 417 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 C17orf105B2RV13 164 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 SSX5O60225 188 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 RDH16O75452 317 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 DRD1P21728 446 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 THBS2P35442 1172 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 MC3RP41968 323 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 RBM39Q14498 530 aaKnown RBP12.53□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF791Q3KP31 576 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-202ENST00000355133 HMBOX1Q6NT76 420 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 RANBP10Q6VN20 620 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 GPR26Q8NDV2 337 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 MDGA1Q8NFP4 955 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 OR2T4Q8NH00 348 aa12.53□□□□□ -0.4
SCN8A-202ENST00000355133 CD200R1Q8TD46 325 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms