RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 TNFRSF4P43489 277 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 TGM3Q08188 693 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 ZNF311Q5JNZ3 666 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 PPP2R2DQ66LE6 453 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 NRROSQ86YC3 692 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 PHC2Q8IXK0 858 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 GAL3ST3Q96A11 431 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 OR2M4Q96R27 311 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 CNPPD1Q9BV87 410 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 TRMT61BQ9BVS5 477 aaKnown RBP20.78■□□□□ 0.92
UPF3A-201ENST00000351487 PLA2G12AQ9BZM1 189 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 ANKRD19PQ9H560 264 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 CERS4Q9HA82 394 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 PAIP2BQ9ULR5 123 aaKnown RBP20.78■□□□□ 0.92
UPF3A-201ENST00000351487 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 CHRM5P08912 532 aaPredicted RBP20.77■□□□□ 0.92
UPF3A-201ENST00000351487 ALOX12P18054 663 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 IFNGR2P38484 337 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 EIF2B2P49770 351 aaKnown RBP20.77■□□□□ 0.92
UPF3A-201ENST00000351487 GAS1P54826 345 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 TAS2R41P59536 307 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 KRR1Q13601 381 aaKnown RBP20.77■□□□□ 0.92
UPF3A-201ENST00000351487 C3orf38Q5JPI3 329 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 PAQR6Q6TCH4 344 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 PAQR7Q86WK9 346 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 GNPDA2Q8TDQ7 276 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 HTRA1Q92743 480 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 DIO2Q92813 273 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 GIMAP5Q96F15 307 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 CCDC32Q9BV29 185 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 SMURF1Q9HCE7 757 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 CTPS2Q9NRF8 586 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 KLHL3Q9UH77 587 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 KLF15Q9UIH9 416 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 ZNF780BQ9Y6R6 833 aa20.77■□□□□ 0.92
UPF3A-201ENST00000351487 PRSS38A1L453 326 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 CTDSP2O14595 271 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 CYP7B1O75881 506 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 RPS19P39019 145 aaKnown RBP20.77■□□□□ 0.91
UPF3A-201ENST00000351487 SOX9P48436 509 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 SEC13P55735 322 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 CHRNEQ04844 493 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 TRAM2Q15035 370 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 TJAP1Q5JTD0 557 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 VN1R4Q7Z5H5 301 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 AMIGO1Q86WK6 493 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 FLCNQ8NFG4 579 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 OR9Q1Q8NGQ5 310 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 TMEM163Q8TC26 289 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 ELSPBP1Q96BH3 223 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 TRMT61AQ96FX7 289 aaKnown RBP20.77■□□□□ 0.91
UPF3A-201ENST00000351487 SLC30A2Q9BRI3 323 aa20.77■□□□□ 0.91
UPF3A-201ENST00000351487 IRGMA1A4Y4 181 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 ISM1B1AKI9 464 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 ATP6V1G1O75348 118 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 NR2F6P10588 404 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 TSPAN31Q12999 210 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 KLHL22Q53GT1 634 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 SLC27A4Q6P1M0 643 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 TEX47Q8TBZ9 253 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 MYADMQ96S97 322 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 SDHCQ99643 169 aaPredicted RBP20.76■□□□□ 0.91
UPF3A-201ENST00000351487 KCNS3Q9BQ31 491 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 ACTRT3Q9BYD9 372 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 BARHL1Q9BZE3 327 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 INIPQ9NRY2 104 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 TRAPPC4Q9Y296 219 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 CHST2Q9Y4C5 530 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 PRODHO43272 600 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 MAT2AP31153 395 aaKnown RBP20.76■□□□□ 0.91
UPF3A-201ENST00000351487 PRKAR1BP31321 381 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 RPS15AP62244 130 aaKnown RBP20.76■□□□□ 0.91
UPF3A-201ENST00000351487 SNAPC1Q16533 368 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 VRK2Q86Y07 508 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 C10orf90Q96M02 699 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 CDCA3Q99618 268 aaPredicted RBP20.76■□□□□ 0.91
UPF3A-201ENST00000351487 EGLN3Q9H6Z9 239 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 FGF20Q9NP95 211 aaPredicted RBP20.76■□□□□ 0.91
UPF3A-201ENST00000351487 EQTNQ9NQ60 294 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 NTMQ9P121 344 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 SLC13A4Q9UKG4 626 aa20.76■□□□□ 0.91
UPF3A-201ENST00000351487 FAM170BA6NMN3 283 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 SCAMP1O15126 338 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 UBXN7O94888 489 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 KCNK2O95069 426 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 ACP2P11117 423 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 CPEP16870 476 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 NDUFS1P28331 727 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 BTN3A2P78410 334 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 ST3GAL3Q11203 375 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 ATAD3BQ5T9A4 648 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 HEPHL1Q6MZM0 1159 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 SLC36A4Q6YBV0 504 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 RASSF6Q6ZTQ3 369 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 NT5CQ8TCD5 201 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 JPH3Q8WXH2 748 aaPredicted RBP20.75■□□□□ 0.91
UPF3A-201ENST00000351487 HPS1Q92902 700 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 FGF14Q92915 247 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 TXNDC15Q96J42 360 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 CEP19Q96LK0 163 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms