RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ZNF791Q3KP31 576 aaPredicted RBP13.45□□□□□ -0.26
RLIM-202ENST00000349225 DCST1Q5T197 706 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 NCEH1Q6PIU2 408 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 ZER1Q7Z7L7 766 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 SAMD12Q8N8I0 201 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 COQ8AQ8NI60 647 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 THAP4Q8WY91 577 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 MRPS31Q92665 395 aaKnown RBP13.45□□□□□ -0.26
RLIM-202ENST00000349225 YIPF5Q969M3 257 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 SEC22CQ9BRL7 303 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 ISYNA1Q9NPH2 558 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 PIPOXQ9P0Z9 390 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 ZFR2Q9UPR6 939 aaKnown RBP13.45□□□□□ -0.26
RLIM-202ENST00000349225 SIRT4Q9Y6E7 314 aaPredicted RBP13.45□□□□□ -0.26
RLIM-202ENST00000349225 KRBOX1C9JBD0 128 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 SH3BP5O60239 455 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 KLHL18O94889 574 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 MT-ND4P03905 459 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 GKP32189 559 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 CSNK1DP48730 415 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 PITPNBP48739 271 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 DGCR2P98153 550 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 MMP21Q8N119 569 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 CLRN3Q8NCR9 226 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 OR6K2Q8NGY2 324 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 OTULINQ96BN8 352 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 CACNG6Q9BXT2 260 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 CHIAQ9BZP6 476 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 CA10Q9NS85 328 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 CLCA2Q9UQC9 943 aa13.45□□□□□ -0.26
RLIM-202ENST00000349225 PLSCR5A0PG75 271 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 WNT1P04628 370 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 MMP12P39900 470 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 SLC1A3P43003 542 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 ARMC12Q5T9G4 340 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 LRRC28Q86X40 367 aaPredicted RBP13.44□□□□□ -0.26
RLIM-202ENST00000349225 ADAMTS14Q8WXS8 1223 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 C12orf57Q99622 126 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 EGLN3Q9H6Z9 239 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 MED9Q9NWA0 146 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 SSNA1O43805 119 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 CLDN7O95471 211 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 WDPCPO95876 746 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 EPHX1P07099 455 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 RPL9P32969 192 aaKnown RBP13.44□□□□□ -0.26
RLIM-202ENST00000349225 CDK5Q00535 292 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 RAB40BQ12829 278 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 COX10Q12887 443 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 PIN1Q13526 163 aaPredicted RBP13.44□□□□□ -0.26
RLIM-202ENST00000349225 TMEM255AQ5JRV8 349 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 DEF8Q6ZN54 512 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 APOBEC3FQ8IUX4 373 aaKnown RBP13.44□□□□□ -0.26
RLIM-202ENST00000349225 VPS37AQ8NEZ2 397 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 OR51Q1Q8NH59 317 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 ERMAPQ96PL5 475 aaPredicted RBP13.44□□□□□ -0.26
RLIM-202ENST00000349225 DPYSL5Q9BPU6 564 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 SLC12A9Q9BXP2 914 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 CFAP97Q9P2B7 532 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 LAMA3Q16787 3333 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 PDCD5O14737 125 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 NTN1O95631 604 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 TYMPP19971 482 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 MELKQ14680 651 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 MBTPS1Q14703 1052 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 ANXA8L1Q5VT79 327 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 PAQR7Q86WK9 346 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 MRPS24Q96EL2 167 aaKnown RBP13.44□□□□□ -0.26
RLIM-202ENST00000349225 TMEM168Q9H0V1 697 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 POLMQ9NP87 494 aaPredicted RBP13.44□□□□□ -0.26
RLIM-202ENST00000349225 DNAJC11Q9NVH1 559 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 SPATA2Q9UM82 520 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 PRKAB1Q9Y478 270 aa13.44□□□□□ -0.26
RLIM-202ENST00000349225 FAM170BA6NMN3 283 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 ANXA2P2A6NMY6 339 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 HNRNPCL2B2RXH8 293 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 NFKBIEO00221 500 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 LDOC1O95751 146 aaPredicted RBP13.43□□□□□ -0.26
RLIM-202ENST00000349225 GAAP10253 952 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 HOXB1P14653 301 aaPredicted RBP13.43□□□□□ -0.26
RLIM-202ENST00000349225 F8A1P23610 371 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 MTNR1AP48039 350 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 ARHGDIBP52566 201 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 TAP2Q03519 686 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 OR1S1Q8NH92 325 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 ASB11Q8WXH4 323 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 ELMOD3Q96FG2 381 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 SECISBP2Q96T21 854 aaKnown RBP13.43□□□□□ -0.26
RLIM-202ENST00000349225 TMEM161AQ9NX61 479 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 ST3GAL5Q9UNP4 418 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 GATBO75879 557 aaKnown RBP13.43□□□□□ -0.26
RLIM-202ENST00000349225 H2AFB2P0C5Z0 115 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 TBXA2RP21731 343 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 IER5LQ5T953 404 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 PODNL1Q6PEZ8 512 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 SKA2Q8WVK7 121 aaPredicted RBP13.43□□□□□ -0.26
RLIM-202ENST00000349225 FOXJ1Q92949 421 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 HIST1H2AHQ96KK5 128 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 ISG20L2Q9H9L3 353 aaKnown RBP13.43□□□□□ -0.26
RLIM-202ENST00000349225 FANCFQ9NPI8 374 aa13.43□□□□□ -0.26
RLIM-202ENST00000349225 LHX3Q9UBR4 397 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms