RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 C1GALT1Q9NS00 363 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ING1Q9UK53 422 aaPredicted RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 NOD1Q9Y239 953 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 LOC105369274A0A096LPK9 316 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 C2orf78A6NCI8 922 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 FAM227AF5H4B4 570 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 H3BN98 237 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 DNASE2O00115 360 aaPredicted RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 AIPO00170 330 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 GABRPO00591 440 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 FFAR1O14842 300 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 SEPT4O43236 478 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 SLC28A2O43868 658 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 B3GALNT1O75752 331 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 CLDN7O95471 211 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 HRGP04196 525 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 IGFBP1P08833 259 aaPredicted RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 DRD2P14416 443 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 CALCRP30988 508 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 CCR7P32248 378 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 PITPNBP48739 271 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ZP1P60852 638 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 GPR85P60893 370 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 EFNB1P98172 346 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 CDK6Q00534 326 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 TAP2Q03519 686 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ACSM1Q08AH1 577 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 CHIT1Q13231 466 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 SLC36A2Q495M3 483 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ATXN7L2Q5T6C5 722 aaPredicted RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 GRHL2Q6ISB3 625 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 FUT10Q6P4F1 479 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 FAM198BQ6UWH4 519 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 RASSF6Q6ZTQ3 369 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 TPRG1Q6ZUI0 275 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 BTN2A1Q7KYR7 527 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 C16orf59Q7L2K0 433 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 KANSL1Q7Z3B3 1105 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 OR4N4Q8N0Y3 316 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 OXR1Q8N573 874 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 BVESQ8NE79 360 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 OR2T35Q8NGX2 323 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 APOBEC4Q8WW27 367 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ST8SIA2Q92186 375 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 KCTD12Q96CX2 325 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 TRMT2BQ96GJ1 504 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 CXorf58Q96LI9 332 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 SFXN2Q96NB2 322 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 SARGQ9BW04 601 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ACTR6Q9GZN1 396 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 POLR2J3Q9H1A7 115 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 C11orf49Q9H6J7 331 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 SEMA3GQ9NS98 782 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ASB6Q9NWX5 421 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 TVP23BQ9NYZ1 205 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ZNF624Q9P2J8 865 aaPredicted RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 RHCGQ9UBD6 479 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 PPIEQ9UNP9 301 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ANGPT4Q9Y264 503 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 FCF1Q9Y324 198 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 MPTX1A8MV57 137 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 CACNB4O00305 520 aaPredicted RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 PRRG1O14668 218 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 TLX2O43763 284 aaPredicted RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 SELENOFO60613 162 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 TBL1XO60907 577 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 NFATC1O95644 943 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 IGSF6O95976 241 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 ASGR1P07306 291 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 SYPP08247 313 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 H2AFB2P0C5Z0 115 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 ARAFP10398 606 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 IDSP22304 550 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 ELAVL4P26378 380 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 SERPINA4P29622 427 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 RECQLP46063 649 aaPredicted RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 LIM2P55344 173 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 ERVFC1P60507 584 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 IRF8Q02556 426 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 GRM7Q14831 915 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 TAF1CQ15572 869 aaPredicted RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 DCST1Q5T197 706 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 PYHIN1Q6K0P9 492 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 NLRC3Q7RTR2 1065 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 OAFQ86UD1 273 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 ADGRG2Q8IZP9 1017 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 PCSK9Q8NBP7 692 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 LINC01599Q8WXQ3 324 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 CLP1Q92989 425 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 MS4A3Q96HJ5 214 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 LRR1Q96L50 414 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 TEFMQ96QE5 360 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 SECISBP2Q96T21 854 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 C7orf50Q9BRJ6 194 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 SAV1Q9H4B6 383 aaPredicted RBP9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 CDCP1Q9H5V8 836 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 MARCH5Q9NX47 278 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 FAM8A1Q9UBU6 413 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 KCNK7Q9Y2U2 307 aa9.74□□□□□ -0.85
CHRNA1-202ENST00000348749 CARNS1A5YM72 827 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms