RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 MLLT3P42568 568 aaPredicted RBP13.97□□□□□ -0.17
NUP50-201ENST00000347635 GPR4P46093 362 aa13.97□□□□□ -0.17
NUP50-201ENST00000347635 TAS2R38P59533 333 aa13.97□□□□□ -0.17
NUP50-201ENST00000347635 NTRK2Q16620 822 aa13.97□□□□□ -0.17
NUP50-201ENST00000347635 SLC5A12Q1EHB4 618 aa13.97□□□□□ -0.17
NUP50-201ENST00000347635 SORCS1Q8WY21 1168 aa13.97□□□□□ -0.17
NUP50-201ENST00000347635 OR4K3Q96R72 315 aa13.97□□□□□ -0.17
NUP50-201ENST00000347635 GTPBP2Q9BX10 602 aaKnown RBP13.97□□□□□ -0.17
NUP50-201ENST00000347635 SLC6A16Q9GZN6 736 aa13.97□□□□□ -0.17
NUP50-201ENST00000347635 RSPH9Q9H1X1 276 aaPredicted RBP13.97□□□□□ -0.17
NUP50-201ENST00000347635 COPS7AQ9UBW8 275 aa13.97□□□□□ -0.17
NUP50-201ENST00000347635 MAB21L2Q9Y586 359 aa13.97□□□□□ -0.17
NUP50-201ENST00000347635 C1orf226A1L170 272 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 H0YIV9 168 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 H3BNC9 293 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 PRLP01236 227 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 C1SP09871 688 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 NDUFV2P19404 249 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 SLC6A6P31641 620 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 EMP3P54852 163 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 TMEM164Q5U3C3 297 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 OR52P1PQ8NH57 321 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 YIPF6Q96EC8 236 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 DUSP21Q9H596 190 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 BEX1Q9HBH7 125 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 SPATA6Q9NWH7 488 aaPredicted RBP13.96□□□□□ -0.17
NUP50-201ENST00000347635 M0R233 179 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 PEX11BO96011 259 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 SCG5P05408 212 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 ITPKBP27987 946 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 RAB40BQ12829 278 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 NRROSQ86YC3 692 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 TIGD4Q8IY51 512 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 PROKR2Q8NFJ6 384 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 SORBS1Q9BX66 1292 aaKnown RBP13.96□□□□□ -0.17
NUP50-201ENST00000347635 UBQLN2Q9UHD9 624 aa13.96□□□□□ -0.17
NUP50-201ENST00000347635 HIDE1A8MVS5 230 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 SCN2BO60939 215 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 BMP1P13497 986 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 MRPS21P82921 87 aaKnown RBP13.96□□□□□ -0.18
NUP50-201ENST00000347635 PON3Q15166 354 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 RABEPKQ7Z6M1 372 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.96□□□□□ -0.18
NUP50-201ENST00000347635 GPALPP1Q8IXQ4 340 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 SYNPOQ8N3V7 929 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 RDH8Q9NYR8 311 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 ASB4Q9Y574 426 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 ZNF8P17098 575 aaPredicted RBP13.96□□□□□ -0.18
NUP50-201ENST00000347635 RPS5P46782 204 aaKnown RBP13.96□□□□□ -0.18
NUP50-201ENST00000347635 RABIFP47224 123 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 TCEAL5Q5H9L2 206 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 C1orf53Q5VUE5 145 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 XAF1Q6GPH4 301 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 ZNF782Q6ZMW2 699 aaPredicted RBP13.96□□□□□ -0.18
NUP50-201ENST00000347635 ACBD7Q8N6N7 88 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 HCAR2Q8TDS4 363 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 NIPSNAP1Q9BPW8 284 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 XKR8Q9H6D3 395 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 PELI2Q9HAT8 420 aa13.96□□□□□ -0.18
NUP50-201ENST00000347635 L7N2F9 121 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 PRODHO43272 600 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 CYP17A1P05093 508 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 ARAFP10398 606 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 MRPL19P49406 292 aaKnown RBP13.95□□□□□ -0.18
NUP50-201ENST00000347635 MRPL58Q14197 206 aaKnown RBP13.95□□□□□ -0.18
NUP50-201ENST00000347635 DPPA4Q7L190 304 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 SLC17A9Q9BYT1 436 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 ABI3Q9P2A4 366 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 HCSTQ9UBK5 93 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 DNMT3AQ9Y6K1 912 aaPredicted RBP13.95□□□□□ -0.18
NUP50-201ENST00000347635 GPR89AB7ZAQ6 455 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 KLKB1P03952 638 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 GPR89BP0CG08 455 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 TNFRSF4P43489 277 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 TSPAN5P62079 268 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 ZNF91Q05481 1191 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 RPL13AP3Q6NVV1 102 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 ANKRD54Q6NXT1 300 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 POMZP3Q6PJE2 187 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 KRT77Q7Z794 578 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 LAX1Q8IWV1 398 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 RPLP0P6Q8NHW5 317 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 OR5M11Q96RB7 305 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 ZNF576Q9H609 170 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 SF3A2Q15428 464 aaKnown RBP13.95□□□□□ -0.18
NUP50-201ENST00000347635 LEXMQ3ZCV2 418 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 MINDY4Q4G0A6 757 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 PEG10Q86TG7 708 aaKnown RBP13.95□□□□□ -0.18
NUP50-201ENST00000347635 COQ8BQ96D53 544 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 TTTY10Q9BZA0 68 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 NDUFAF4Q9P032 175 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 TRBV4-1A0A0J9YWV2 114 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 C2orf74A8MZ97 194 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 ACTC1P68032 377 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 ACTA1P68133 377 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 MAP4K2Q12851 820 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 FAM214AQ32MH5 1076 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 BAIAP2L2Q6UXY1 529 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 BHLHA9Q7RTU4 235 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 Q8N9G6 341 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms