RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 PRR7Q8TB68 274 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 SLC2A12Q8TD20 617 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 ANKRD9Q96BM1 317 aaPredicted RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 PPWD1Q96BP3 646 aaKnown RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 SLC7A6OSQ96CW6 309 aaPredicted RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 CNRIP1Q96F85 164 aaPredicted RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 PANX1Q96RD7 426 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 LIN28AQ9H9Z2 209 aaKnown RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 OLAHQ9NV23 265 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 GID8Q9NWU2 228 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 LRFN1Q9P244 771 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 COPS7AQ9UBW8 275 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 ZNF223Q9UK11 482 aaPredicted RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 USP9XQ93008 2570 aaPredicted RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 DIDO1Q9BTC0 2240 aaKnown RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 ANKRD65E5RJM6 399 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 RNASET2O00584 256 aaKnown RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 GYG2O15488 501 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 PRKNO60260 465 aaPredicted RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 SCN2BO60939 215 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 RASAL1O95294 804 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 KRT16P08779 473 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 CSNK2A2P19784 350 aaPredicted RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 GPC1P35052 558 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 CD96P40200 585 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 RASSF2P50749 326 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 XKP51811 444 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 MLF1P58340 268 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 TRMT5Q32P41 509 aaKnown RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 COQ5Q5HYK3 327 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 SPINK14Q6IE38 97 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 ZNF621Q6ZSS3 439 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 YTHDF3Q7Z739 585 aaKnown RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 DEFB107AQ8IZN7 70 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 CLEC4FQ8N1N0 589 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 ZNF321PQ8N8H1 164 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 PTPMT1Q8WUK0 201 aaPredicted RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 TANKQ92844 425 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 ZBED6CLQ96FA7 236 aaPredicted RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 CCDC115Q96NT0 180 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 CNPPD1Q9BV87 410 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 TRIM8Q9BZR9 551 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 GLIPR2Q9H4G4 154 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 SERHLQ9NQF3 203 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 SLC6A13Q9NSD5 602 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 TAS2R1Q9NYW7 299 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 PCDHGB4Q9UN71 923 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 SNX8Q9Y5X2 465 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 FLNBO75369 2602 aaKnown RBP12.79□□□□□ -0.36
TPM4-202ENST00000344824 HECTD1Q9ULT8 2610 aa12.79□□□□□ -0.36
TPM4-202ENST00000344824 A0A096LPI6 279 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 ANKUB1A6NFN9 424 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 HNRNPCL1O60812 293 aaKnown RBP12.78□□□□□ -0.36
TPM4-202ENST00000344824 ITGA10O75578 1167 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 SLC25A12O75746 678 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 ZFAND5O76080 213 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 AGFG2O95081 481 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 GPR75O95800 540 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 CD46P15529 392 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 STT3AP46977 705 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 CYB561P49447 251 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 CDK9P50750 372 aaKnown RBP12.78□□□□□ -0.36
TPM4-202ENST00000344824 PSME3P61289 254 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 HBA1P69905 142 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 SPTBN1Q01082 2364 aaKnown RBP12.78□□□□□ -0.36
TPM4-202ENST00000344824 SPTAN1Q13813 2472 aaKnown RBP12.78□□□□□ -0.36
TPM4-202ENST00000344824 LTB4RQ15722 352 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 INAQ16352 499 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 FHL5Q5TD97 284 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 C6orf163Q5TEZ5 329 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 ZNF468Q5VIY5 522 aaPredicted RBP12.78□□□□□ -0.36
TPM4-202ENST00000344824 C16orf89Q6UX73 402 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 HSDL2Q6YN16 418 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 C16orf47Q6ZP98 133 aaPredicted RBP12.78□□□□□ -0.36
TPM4-202ENST00000344824 SZRD1Q7Z422 152 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 GALNTL5Q7Z4T8 443 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 LGI4Q8N135 537 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 LRRC25Q8N386 305 aaPredicted RBP12.78□□□□□ -0.36
TPM4-202ENST00000344824 DPP10Q8N608 796 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 HORMAD2Q8N7B1 307 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 TMEM178AQ8NBL3 297 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 MORN4Q8NDC4 146 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 ADCY4Q8NFM4 1077 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 OR5AK3PQ8NH89 298 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 ZFP28Q8NHY6 868 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 FAR1Q8WVX9 515 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 OR5P2Q8WZ92 322 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 LRRC58Q96CX6 371 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 RBM18Q96H35 190 aaKnown RBP12.78□□□□□ -0.36
TPM4-202ENST00000344824 ZNF764Q96H86 408 aaPredicted RBP12.78□□□□□ -0.36
TPM4-202ENST00000344824 MAGED4Q96JG8 741 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 AMDHD1Q96NU7 426 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 TAAR6Q96RI8 345 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 BTBD10Q9BSF8 475 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 PAIP1Q9H074 479 aaKnown RBP12.78□□□□□ -0.36
TPM4-202ENST00000344824 TAS2R7Q9NYW3 318 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 BTNL2Q9UIR0 455 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 PACSIN3Q9UKS6 424 aa12.78□□□□□ -0.36
TPM4-202ENST00000344824 MYO1GB0I1T2 1018 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms