RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CRTC2Q53ET0 693 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 RASSF6Q6ZTQ3 369 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 MAMDC2Q7Z304 686 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 SATL1Q86VE3 508 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 GID4Q8IVV7 300 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 OR5T3Q8NGG3 340 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 OR14A16Q8NHC5 309 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 MCFD2Q8NI22 146 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 YTHDF1Q9BYJ9 559 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 MKLN1Q9UL63 735 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 ERVK-19Q9WJR5 959 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 DIRAS1O95057 198 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 EPHA5P54756 1037 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 MEDAGQ5VYS4 303 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 IL20RBQ6UXL0 311 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 TMPPEQ6ZT21 453 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 P2RY8Q86VZ1 359 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 TMEM19Q96HH6 336 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 TPK1Q9H3S4 243 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 ATP13A2Q9NQ11 1180 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 LAMP5Q9UJQ1 280 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 ACSL6Q9UKU0 697 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 LOXL2Q9Y4K0 774 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 COMMD3-BMI1R4GMX3 469 aa15.5■□□□□ 0.07
SMARCA4-201ENST00000344626 OXSR1O95747 527 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 GPR75O95800 540 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 CH25HO95992 272 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 TGFBR2P37173 567 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 GARNL3Q5VVW2 1013 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 ANKFN1Q8N957 763 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 OR2L3Q8NG85 312 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 FAM129BQ96TA1 746 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 EVA1AQ9H8M9 152 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 TRIM36Q9NQ86 728 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 SLITRK5O94991 958 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 RIN1Q13671 783 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 CROCCP3Q8IVE0 287 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 GPR137CQ8N3F9 429 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 SFXN5Q8TD22 340 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 C1QTNF2Q9BXJ5 285 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 PCDHB16Q9NRJ7 776 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 MCUBQ9NWR8 336 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 PCDHGB2Q9Y5G2 931 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 TLX2O43763 284 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 AIREO43918 545 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 PSIP1O75475 530 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 SLCO2B1O94956 709 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 MC3RP41968 323 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 SF3A2Q15428 464 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 GGTA1PQ4G0N0 100 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 ZNF548Q8NEK5 533 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 OR51Q1Q8NH59 317 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 GPR179Q6PRD1 2367 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 PRODHO43272 600 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 EIF1AXP47813 144 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 DENND5AQ6IQ26 1287 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 ENPP6Q6UWR7 440 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 CLEC4MQ9H2X3 399 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 TRBV11-1A0A0K0K1C0 115 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 ANTXRLA6NF34 631 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 AREL1O15033 823 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 ANKRD28O15084 1053 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 CKMT2P17540 419 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 CBX5P45973 191 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 CLCA4Q14CN2 919 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 BICRALQ6AI39 1079 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 SHQ1Q6PI26 577 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 FAM131AQ6UXB0 335 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 ZNF619Q8N2I2 560 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 GALNT15Q8N3T1 639 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 OR2T33Q8NG76 320 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 UBASH3BQ8TF42 649 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 LRRN3Q9H3W5 708 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 TMEM138Q9NPI0 162 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 COMMD9Q9P000 198 aa15.49■□□□□ 0.07
SMARCA4-201ENST00000344626 LOC100130705A0A1B0GUX0 176 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 A0A1B0GVI7 797 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 CSO75390 466 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 RAB36O95755 333 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 WDR77Q9BQA1 342 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 CHCHD6Q9BRQ6 235 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 MAGIXQ9H6Y5 334 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 TMEM185BQ9H7F4 350 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 PDFQ9HBH1 243 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 NANSQ9NR45 359 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 ETFAP13804 333 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 AQP4P55087 323 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 DMPKQ09013 629 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 ZNF846Q147U1 533 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 TRIP6Q15654 476 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 PRSS36Q5K4E3 855 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 ZSCAN4Q8NAM6 433 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 UBTD2Q8WUN7 234 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 EURLQ9NYK6 297 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 IMPA1P29218 277 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 SLC19A1P41440 591 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 TAS2R43P59537 309 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 CRYZQ08257 329 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 CCNIQ14094 377 aa15.48■□□□□ 0.07
SMARCA4-201ENST00000344626 KIAA1614Q5VZ46 1190 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms