RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 MAN2A2P49641 1150 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 STXBP1P61764 594 aaKnown RBP13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 ALDH6A1Q02252 535 aaKnown RBP13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 SNAPC1Q16533 368 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 CARTPTQ16568 116 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 SFXN5Q8TD22 340 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 ELP4Q96EB1 424 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 POLR2J2Q9GZM3 115 aaKnown RBP13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 NUAK2Q9H093 628 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 SLC38A1Q9H2H9 487 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 NKX2-4Q9H2Z4 354 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 BCL2L10Q9HD36 194 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 CARD8Q9Y2G2 431 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 MYL12BO14950 172 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 ZSCAN9O15535 394 aaPredicted RBP13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 ALPPP05187 535 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 NR2F6P10588 404 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 SOX6P35712 828 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 ACTR1BP42025 376 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 ACTR1AP61163 376 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 TIMM50Q3ZCQ8 353 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 TMEM201Q5SNT2 666 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 LIPKQ5VXJ0 399 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 SDE2Q6IQ49 451 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 ZNF425Q6IV72 752 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 ANKRD54Q6NXT1 300 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 VN1R4Q7Z5H5 301 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 KIF18BQ86Y91 864 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 OR10G6Q8NH81 332 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 TRMT61AQ96FX7 289 aaKnown RBP13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 TAPBPLQ9BX59 468 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 SRMSQ9H3Y6 488 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 NDOR1Q9UHB4 597 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 LSM2Q9Y333 95 aaKnown RBP13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 A0A087WUU8 490 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 A0A0G2JPF8 293 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 HNRNPCL2B2RXH8 293 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 HNRNPCL3B7ZW38 293 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 CTDSP2O14595 271 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 FCMRO60667 390 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 SCG5P05408 212 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 HBQ1P09105 142 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 HNRNPCL4P0DMR1 293 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 GIPRP48546 466 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 RNF144AP50876 292 aaPredicted RBP13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 LIMK1P53667 647 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 ID2Q02363 134 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 TGM3Q08188 693 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 GNA13Q14344 377 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 SYT14P1Q58G82 188 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 FAM111BQ6SJ93 734 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 SHISA5Q8N114 240 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 IL17RCQ8NAC3 791 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 SLC9A6Q92581 669 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 FAM46AQ96IP4 442 aaKnown RBP13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 C3orf14Q9HBI5 128 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 MKLN1Q9UL63 735 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 SNX7Q9UNH6 387 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 SCN2AQ99250 2005 aa13.98□□□□□ -0.17
VIPAS39-202ENST00000343765 SDK1Q7Z5N4 2213 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 ZNF860A6NHJ4 632 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 FAM170BA6NMN3 283 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 DNAJB6O75190 326 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 SLITRK5O94991 958 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 RASGRP1O95267 797 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 DLGAP3O95886 979 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 TGM4P49221 684 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 PDX1P52945 283 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 DEFB134Q4QY38 66 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 PPP2R2DQ66LE6 453 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 ZNF730Q6ZMV8 503 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 SHFQ7M4L6 423 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 TMEFF1Q8IYR6 380 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 SRFBP1Q8NEF9 429 aaKnown RBP13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 TMEM203Q969S6 136 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 ELSPBP1Q96BH3 223 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 MND1Q9BWT6 205 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 PINK1Q9BXM7 581 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 ASPNQ9BXN1 380 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 NXF2Q9GZY0 626 aaKnown RBP13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 TMEM168Q9H0V1 697 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 KIR3DX1Q9H7L2 352 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 SACM1LQ9NTJ5 587 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 ZNF624Q9P2J8 865 aaPredicted RBP13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 A0A1W2PQF6 199 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 RGS5O15539 181 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 ZIC2O95409 532 aaPredicted RBP13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 CH25HO95992 272 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 EGFP01133 1207 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 ALOX5P09917 674 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 SIM1P81133 766 aaPredicted RBP13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 RHAGQ02094 409 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 TFF2Q03403 129 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 ATAD3BQ5T9A4 648 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 MEDAGQ5VYS4 303 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 PRICKLE2Q7Z3G6 844 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 PAQR7Q86WK9 346 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 NRROSQ86YC3 692 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 EGFL6Q8IUX8 553 aa13.97□□□□□ -0.17
VIPAS39-202ENST00000343765 MINDY2Q8NBR6 621 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms