RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 NXPE4Q6UWF7 544 aa21.08■□□□□ 0.97
TRIM28-202ENST00000341753 IL17RCQ8NAC3 791 aa21.08■□□□□ 0.97
TRIM28-202ENST00000341753 OR8D4Q8NGM9 314 aa21.08■□□□□ 0.97
TRIM28-202ENST00000341753 FGF11Q92914 225 aa21.08■□□□□ 0.97
TRIM28-202ENST00000341753 OMA1Q96E52 524 aa21.08■□□□□ 0.97
TRIM28-202ENST00000341753 ARHGAP9Q9BRR9 750 aa21.08■□□□□ 0.97
TRIM28-202ENST00000341753 SAP130Q9H0E3 1048 aa21.08■□□□□ 0.97
TRIM28-202ENST00000341753 CNIH4Q9P003 139 aa21.08■□□□□ 0.97
TRIM28-202ENST00000341753 KIAA0100Q14667 2235 aaKnown RBP21.08■□□□□ 0.97
TRIM28-202ENST00000341753 TRAV6A0A075B6T7 132 aa21.08■□□□□ 0.96
TRIM28-202ENST00000341753 GABRPO00591 440 aa21.08■□□□□ 0.96
TRIM28-202ENST00000341753 TRIM3O75382 744 aaPredicted RBP21.08■□□□□ 0.96
TRIM28-202ENST00000341753 ELK1P19419 428 aa21.08■□□□□ 0.96
TRIM28-202ENST00000341753 CDK5Q00535 292 aa21.08■□□□□ 0.96
TRIM28-202ENST00000341753 HENMT1Q5T8I9 393 aaKnown RBP21.08■□□□□ 0.96
TRIM28-202ENST00000341753 KIAA1161Q6NSJ0 714 aa21.08■□□□□ 0.96
TRIM28-202ENST00000341753 CPXM2Q8N436 756 aa21.08■□□□□ 0.96
TRIM28-202ENST00000341753 ANKK1Q8NFD2 765 aa21.08■□□□□ 0.96
TRIM28-202ENST00000341753 F2RL3Q96RI0 385 aa21.08■□□□□ 0.96
TRIM28-202ENST00000341753 QRSL1Q9H0R6 528 aaKnown RBP21.08■□□□□ 0.96
TRIM28-202ENST00000341753 HS3ST2Q9Y278 367 aa21.08■□□□□ 0.96
TRIM28-202ENST00000341753 ITM2BQ9Y287 266 aa21.08■□□□□ 0.96
TRIM28-202ENST00000341753 A0A0A6YYJ9 748 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 A0A0G2JN53 185 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 TMEM129A0AVI4 362 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 GSAPA4D1B5 854 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 PLPP1O14494 284 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 PDPK1O15530 556 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 PRODHO43272 600 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 SMSP52788 366 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 TAP2Q03519 686 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 CNTN1Q12860 1018 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 KREMEN2Q8NCW0 462 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 ART5Q96L15 291 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 KCNJ15Q99712 375 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 EXTL2Q9UBQ6 330 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 IL20RAQ9UHF4 553 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 HIDE1A8MVS5 230 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 FRS3O43559 492 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 VIPR1P32241 457 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 RAB40BQ12829 278 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 GPR176Q14439 515 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 SLC36A4Q6YBV0 504 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 OR8H3Q8N146 312 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 TTC9Q92623 222 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 ZNF607Q96SK3 696 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 ZBP1Q9H171 429 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 SIRT3Q9NTG7 399 aaPredicted RBP21.07■□□□□ 0.96
TRIM28-202ENST00000341753 ACAD8Q9UKU7 415 aa21.07■□□□□ 0.96
TRIM28-202ENST00000341753 LEFTY1O75610 366 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 BUD31P41223 144 aaPredicted RBP21.06■□□□□ 0.96
TRIM28-202ENST00000341753 EFNB1P98172 346 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 TEAD2Q15562 447 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 IDNKQ5T6J7 187 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 TMEM215Q68D42 235 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 SLC9B2Q86UD5 537 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 KLHDC8AQ8IYD2 350 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 OR2A12Q8NGT7 310 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 GLYATL1Q969I3 302 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 CPEB1Q9BZB8 566 aaKnown RBP21.06■□□□□ 0.96
TRIM28-202ENST00000341753 ZNF222Q9UK12 451 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 TRDV1A0A1B0GX56 115 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 MMP20O60882 483 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 SYPP08247 313 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 NR2F1P10589 423 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 FGF9P31371 208 aaPredicted RBP21.06■□□□□ 0.96
TRIM28-202ENST00000341753 SLC1A3P43003 542 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 PRLHRP49683 370 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 PRKAG1P54619 331 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 NTHL1P78549 312 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 ARSIQ5FYB1 569 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 TRMT11Q7Z4G4 463 aaKnown RBP21.06■□□□□ 0.96
TRIM28-202ENST00000341753 TRAM1L1Q8N609 369 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 OTULINQ96BN8 352 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 FGF20Q9NP95 211 aaPredicted RBP21.06■□□□□ 0.96
TRIM28-202ENST00000341753 SLC25A13Q9UJS0 675 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 BTN3A3O00478 584 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 EPPINO95925 133 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 TFPIP10646 304 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 DDCP20711 480 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 PRKACBP22694 351 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 POLR2LP62875 67 aaKnown RBP21.06■□□□□ 0.96
TRIM28-202ENST00000341753 TRILQ7L0X0 811 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 METTL3Q86U44 580 aaKnown RBP21.06■□□□□ 0.96
TRIM28-202ENST00000341753 NR2C2APQ86WQ0 139 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 MORN4Q8NDC4 146 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 SMPDL3AQ92484 453 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.06■□□□□ 0.962e-6■□□□□ 11.2
TRIM28-202ENST00000341753 OR51I1Q9H343 314 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 UCKL1Q9NWZ5 548 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 MGAT4AQ9UM21 535 aa21.06■□□□□ 0.96
TRIM28-202ENST00000341753 GOLGA4Q13439 2230 aaKnown RBP21.05■□□□□ 0.96
TRIM28-202ENST00000341753 A0A1W2PRQ8 180 aa21.05■□□□□ 0.96
TRIM28-202ENST00000341753 ALPPL2P10696 532 aa21.05■□□□□ 0.96
TRIM28-202ENST00000341753 ENPP1P22413 925 aa21.05■□□□□ 0.96
TRIM28-202ENST00000341753 PNLIPRP1P54315 467 aa21.05■□□□□ 0.96
TRIM28-202ENST00000341753 SMIM11AP58511 58 aa21.05■□□□□ 0.96
TRIM28-202ENST00000341753 RNASE12Q5GAN4 147 aaKnown RBP21.05■□□□□ 0.96
TRIM28-202ENST00000341753 MPP7Q5T2T1 576 aa21.05■□□□□ 0.96
TRIM28-202ENST00000341753 CD200R1LQ6Q8B3 271 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms