RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 RPLP0P6Q8NHW5 317 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 ADAMTS15Q8TE58 950 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 VMP1Q96GC9 406 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 FAM46AQ96IP4 442 aaKnown RBP9.71□□□□□ -0.85
LIMA1-201ENST00000341247 LRR1Q96L50 414 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 MRGPRX1Q96LB2 322 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 SLC6A18Q96N87 628 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 ADAP2Q9NPF8 381 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 CLEC1BQ9P126 229 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 MRPS2Q9Y399 296 aaKnown RBP9.71□□□□□ -0.85
LIMA1-201ENST00000341247 CBFA2T3O75081 653 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 PXNP49023 591 aaPredicted RBP9.71□□□□□ -0.85
LIMA1-201ENST00000341247 ILKQ13418 452 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 C1orf61Q13536 156 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 GPR68Q15743 365 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 FBXO42Q6P3S6 717 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 RRM2BQ7LG56 351 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 ASPGQ86U10 573 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 OR5T3Q8NGG3 340 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 CDS1Q92903 461 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 RBCK1Q9BYM8 510 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 ENOPH1Q9UHY7 261 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 SNX7Q9UNH6 387 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 NCKAP1Q9Y2A7 1128 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 PIAS3Q9Y6X2 628 aa9.71□□□□□ -0.85
LIMA1-201ENST00000341247 LRRC72A6NJI9 287 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 EMC8O43402 210 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 CELA2BP08218 269 aaPredicted RBP9.71□□□□□ -0.86
LIMA1-201ENST00000341247 CDH3P22223 829 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 TRHRP34981 398 aaPredicted RBP9.71□□□□□ -0.86
LIMA1-201ENST00000341247 AHRP35869 848 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 GPR4P46093 362 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 BCAP31P51572 246 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 PPP1CAP62136 330 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 TRA2BP62995 288 aaKnown RBP9.71□□□□□ -0.86
LIMA1-201ENST00000341247 AGERQ15109 404 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 SSX1Q16384 188 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 ZNF730Q6ZMV8 503 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 PRICKLE2Q7Z3G6 844 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 SLC22A16Q86VW1 577 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 FAM83FQ8NEG4 500 aaPredicted RBP9.71□□□□□ -0.86
LIMA1-201ENST00000341247 RASSF5Q8WWW0 418 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 S100ZQ8WXG8 99 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 WDR92Q96MX6 357 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 PITHD1Q9GZP4 211 aaPredicted RBP9.71□□□□□ -0.86
LIMA1-201ENST00000341247 SLC38A1Q9H2H9 487 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 SEMA4GQ9NTN9 838 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 GIN1Q9NXP7 522 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 EHD3Q9NZN3 535 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 ANKMY1Q9P2S6 941 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 MSRAQ9UJ68 235 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 CES1P1Q9UKY3 287 aa9.71□□□□□ -0.86
LIMA1-201ENST00000341247 A0A087WUU8 490 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 CENPVL1A0A0U1RR11 272 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 FAM170BA6NMN3 283 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 KPNA4O00629 521 aaPredicted RBP9.7□□□□□ -0.86
LIMA1-201ENST00000341247 GUCY1B2O75343 617 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 GPX5O75715 221 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 CYP7B1O75881 506 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 ZIC2O95409 532 aaPredicted RBP9.7□□□□□ -0.86
LIMA1-201ENST00000341247 LGI1O95970 557 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 ALPPP05187 535 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 ALOX12P18054 663 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 NDUFV2P19404 249 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 TNFRSF4P43489 277 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 GSTM5P46439 218 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 ABATP80404 500 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 RGS1Q08116 209 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 GPR18Q14330 331 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 DEFB110Q30KQ9 67 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 LIPKQ5VXJ0 399 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 ZNF425Q6IV72 752 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 BHLHB9Q6PI77 547 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 USP43Q70EL4 1123 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 NKAIN4Q8IVV8 208 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 BBS10Q8TAM1 723 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 SLC35A4Q96G79 324 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 CDADC1Q9BWV3 514 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 RMI1Q9H9A7 625 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 C3orf14Q9HBI5 128 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 QPCTLQ9NXS2 382 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 TCRBV21S2A2A0A5A6 115 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 RGS5O15539 181 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 SLC35G6P0C7Q6 338 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 TYRP1P17643 537 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 RGS8P57771 180 aaPredicted RBP9.7□□□□□ -0.86
LIMA1-201ENST00000341247 RUNX2Q13950 521 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 TRMT12Q53H54 448 aaKnown RBP9.7□□□□□ -0.86
LIMA1-201ENST00000341247 ATAD3BQ5T9A4 648 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 SLX4IPQ5VYV7 408 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 ZC3H14Q6PJT7 736 aaKnown RBP9.7□□□□□ -0.86
LIMA1-201ENST00000341247 B3GLCTQ6Y288 498 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 NRROSQ86YC3 692 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 ZFP41Q8N8Y5 198 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 KLHL6Q8WZ60 621 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 MRPL38Q96DV4 380 aaKnown RBP9.7□□□□□ -0.86
LIMA1-201ENST00000341247 POLR2J2Q9GZM3 115 aaKnown RBP9.7□□□□□ -0.86
LIMA1-201ENST00000341247 KIR3DX1Q9H7L2 352 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 DSPPQ9NZW4 1301 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 LINC00854A0A1B0GVQ3 168 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms