RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 CD84Q9UIB8 345 aa16.03■□□□□ 0.16
CDK11B-201ENST00000340677 PPIEQ9UNP9 301 aaKnown RBP16.03■□□□□ 0.16
CDK11B-201ENST00000340677 COL4A6Q14031 1691 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 PRORSD1PA6NEY8 169 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 ZNF44P15621 663 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 ENGP17813 658 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 EFNA1P20827 205 aaPredicted RBP16.02■□□□□ 0.16
CDK11B-201ENST00000340677 CD200P41217 278 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 CDKN2CP42773 168 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 DAOAP59103 153 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 YWHAZP63104 245 aaKnown RBP16.02■□□□□ 0.16
CDK11B-201ENST00000340677 NRG1Q02297 640 aaPredicted RBP16.02■□□□□ 0.16
CDK11B-201ENST00000340677 SLBPQ14493 270 aaKnown RBP eCLIP16.02■□□□□ 0.16
CDK11B-201ENST00000340677 NR6A1Q15406 480 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 FCN2Q15485 313 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 SLC25A52Q3SY17 297 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 CHRFAM7AQ494W8 412 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 SAXO2Q658L1 398 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 LINGO2Q7L985 606 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 RANBP3LQ86VV4 465 aaPredicted RBP16.02■□□□□ 0.16
CDK11B-201ENST00000340677 SPATA13Q96N96 652 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 SARGQ9BW04 601 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 SLC28A3Q9HAS3 691 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 STAP1Q9ULZ2 295 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 C19orf53Q9UNZ5 99 aaPredicted RBP16.02■□□□□ 0.16
CDK11B-201ENST00000340677 CLCA2Q9UQC9 943 aa16.02■□□□□ 0.16
CDK11B-201ENST00000340677 LCHNA4D1U4 455 aa16.02■□□□□ 0.15
CDK11B-201ENST00000340677 OR2W5A6NFC9 320 aa16.02■□□□□ 0.15
CDK11B-201ENST00000340677 RGS11O94810 467 aa16.02■□□□□ 0.15
CDK11B-201ENST00000340677 IGHV2-5P01817 119 aa16.02■□□□□ 0.15
CDK11B-201ENST00000340677 ERCC1P07992 297 aaPredicted RBP16.02■□□□□ 0.15
CDK11B-201ENST00000340677 LSM6P62312 80 aaKnown RBP16.02■□□□□ 0.15
CDK11B-201ENST00000340677 VAMP2P63027 116 aa16.02■□□□□ 0.15
CDK11B-201ENST00000340677 MAD2L1Q13257 205 aaPredicted RBP16.02■□□□□ 0.15
CDK11B-201ENST00000340677 PNLIPRP3Q17RR3 467 aa16.02■□□□□ 0.15
CDK11B-201ENST00000340677 PLEKHN1Q494U1 663 aaPredicted RBP16.02■□□□□ 0.15
CDK11B-201ENST00000340677 RASGEF1AQ8N9B8 481 aa16.02■□□□□ 0.15
CDK11B-201ENST00000340677 NAXEQ8NCW5 288 aa16.02■□□□□ 0.15
CDK11B-201ENST00000340677 HASPINQ8TF76 798 aa16.02■□□□□ 0.15
CDK11B-201ENST00000340677 RAB24Q969Q5 203 aa16.02■□□□□ 0.15
CDK11B-201ENST00000340677 XKRY2A2RUG3 117 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 LRIT2A6NDA9 550 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 SURF4O15260 269 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 XPNPEP2O43895 674 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 SNRNP70P08621 437 aaKnown RBP16.01■□□□□ 0.15
CDK11B-201ENST00000340677 RHCEP18577 417 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 TWF1Q12792 350 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 GAB1Q13480 694 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 BOP1Q14137 746 aaKnown RBP16.01■□□□□ 0.15
CDK11B-201ENST00000340677 SURF2Q15527 256 aaPredicted RBP16.01■□□□□ 0.15
CDK11B-201ENST00000340677 C14orf28Q4W4Y0 310 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 CERCAMQ5T4B2 595 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 TBPL2Q6SJ96 375 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 C3P1Q6ZMU1 363 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 C19orf18Q8NEA5 215 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 ACTL9Q8TC94 416 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 CLEC4CQ8WTT0 213 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 PHYHIPQ92561 330 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 PEBP4Q96S96 227 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 NPY6RQ99463 290 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 CD244Q9BZW8 370 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 SMOC1Q9H4F8 434 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 POPDC2Q9HBU9 364 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 MARCH5Q9NX47 278 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 USP3Q9Y6I4 520 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 MYO16Q9Y6X6 1858 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 PLA2G10O15496 165 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 OR10H3O60404 316 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 TIMP1P01033 207 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 RPL22P35268 128 aaKnown RBP16.01■□□□□ 0.15
CDK11B-201ENST00000340677 DCDP81605 110 aaKnown RBP16.01■□□□□ 0.15
CDK11B-201ENST00000340677 CD47Q08722 323 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 SLC39A12Q504Y0 691 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 ATPAF1Q5TC12 328 aaPredicted RBP16.01■□□□□ 0.15
CDK11B-201ENST00000340677 NKAPQ8N5F7 415 aaKnown RBP16.01■□□□□ 0.15
CDK11B-201ENST00000340677 CPNE2Q96FN4 548 aaPredicted RBP16.01■□□□□ 0.15
CDK11B-201ENST00000340677 FAM210BQ96KR6 192 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 IL19Q9UHD0 177 aa16.01■□□□□ 0.15
CDK11B-201ENST00000340677 MRTO4Q9UKD2 239 aaKnown RBP16.01■□□□□ 0.15
CDK11B-201ENST00000340677 GLYATL1P3A0A0U1RQE8 302 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 H7C4K7 107 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 TSPAN3O60637 253 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 GRAP2O75791 330 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 EFEMP2O95967 443 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 ITGAVP06756 1048 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 PAMP19021 973 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 POU3F2P20265 443 aaPredicted RBP16■□□□□ 0.15
CDK11B-201ENST00000340677 SLC7A9P82251 487 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 HYAL4Q2M3T9 481 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 C9orf64Q5T6V5 341 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 YOD1Q5VVQ6 348 aaPredicted RBP16■□□□□ 0.15
CDK11B-201ENST00000340677 MBLAC2Q68D91 279 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 KIAA1161Q6NSJ0 714 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 WASH2PQ6VEQ5 465 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 PTCHD4Q6ZW05 846 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 KCTD6Q8NC69 237 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 ADPRHL1Q8NDY3 354 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 VWCEQ96DN2 955 aa16■□□□□ 0.15
CDK11B-201ENST00000340677 PACRGQ96M98 296 aaPredicted RBP16■□□□□ 0.15
CDK11B-201ENST00000340677 TGM7Q96PF1 710 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms