RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 TMPRSS12Q86WS5 348 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 CCDC116Q8IYX3 515 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 ICA1LQ8NDH6 482 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 NFKBIDQ8NI38 313 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 RHBDD1Q8TEB9 315 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 PYDC1Q8WXC3 89 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 ALOXE3Q9BYJ1 711 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 ZNF700Q9H0M5 742 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 ZNF232Q9UNY5 417 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 CACNA1EQ15878 2313 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 SAGE2PA6NJ88 616 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 TMEM229AB2RXF0 380 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 POLR1CO15160 346 aaPredicted RBP6.69□□□□□ -1.34
NUP43-201ENST00000340413 MED26O95402 600 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 ACP2P11117 423 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 ZNF26P17031 533 aaPredicted RBP6.69□□□□□ -1.34
NUP43-201ENST00000340413 EFR3AQ14156 821 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 LARS2Q15031 903 aaKnown RBP6.69□□□□□ -1.34
NUP43-201ENST00000340413 EXT1Q16394 746 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 NKAIN1Q4KMZ8 207 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 COX20Q5RI15 118 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 HMBOX1Q6NT76 420 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 TMEM107Q6UX40 140 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 ZDHHC21Q8IVQ6 265 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 PEX5LQ8IYB4 626 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 MARVELD2Q8N4S9 558 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 M1APQ8TC57 530 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 PROX1Q92786 737 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 TAMM41Q96BW9 452 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 HSH2DQ96JZ2 352 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 ZNF300Q96RE9 604 aaPredicted RBP6.69□□□□□ -1.34
NUP43-201ENST00000340413 SECISBP2Q96T21 854 aaKnown RBP6.69□□□□□ -1.34
NUP43-201ENST00000340413 GPR87Q9BY21 358 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 Q9N2J8 555 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.69□□□□□ -1.34
NUP43-201ENST00000340413 TESQ9UGI8 421 aaKnown RBP6.69□□□□□ -1.34
NUP43-201ENST00000340413 SLC35A3Q9Y2D2 325 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 GPR55Q9Y2T6 319 aaPredicted RBP6.69□□□□□ -1.34
NUP43-201ENST00000340413 SZT2Q5T011 3432 aa6.69□□□□□ -1.34
NUP43-201ENST00000340413 REV3LO60673 3130 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 PRKD3O94806 890 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 OR5F1O95221 314 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 IL33O95760 270 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 ANXA8P13928 327 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 PDX1P52945 283 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 ALDH6A1Q02252 535 aaKnown RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 AMZ1Q400G9 498 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 CRTC2Q53ET0 693 aaPredicted RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 DCAF12Q5T6F0 453 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 RNF111Q6ZNA4 994 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 MMP21Q8N119 569 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 LILRA2Q8N149 483 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 PARP8Q8N3A8 854 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 OR4C15Q8NGM1 316 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 OR1N1Q8NGS0 311 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 PIP5K1AQ99755 562 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 GTPBP2Q9BX10 602 aaKnown RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 TMEM9Q9P0T7 183 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 EGFL7Q9UHF1 273 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 GOLGA4Q13439 2230 aaKnown RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 AGAP5A6NIR3 686 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 PATE3B3GLJ2 98 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 C9J4A7 227 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 HCRTR1O43613 425 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 SLC28A2O43868 658 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 IFNW1P05000 195 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 NR2F1P10589 423 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 UQCRBP14927 111 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 NT5EP21589 574 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 EMDP50402 254 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 SUMO3P55854 103 aaPredicted RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 SIM1P81133 766 aaPredicted RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 DUSP2Q05923 314 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 DAG1Q14118 895 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 FAHD1Q6P587 224 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 DNAJC14Q6Y2X3 702 aaPredicted RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 OFCC1Q8IZS5 231 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 TMEM52Q8NDY8 209 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 OR5L2Q8NGL0 311 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 PHF10Q8WUB8 498 aaKnown RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 NRG4Q8WWG1 115 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 SLC35A4Q96G79 324 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 PRRC1Q96M27 445 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 OR6C1Q96RD1 312 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 TREX2Q9BQ50 279 aaPredicted RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 FUZQ9BT04 418 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 SLC38A1Q9H2H9 487 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 KRCC1Q9NPI7 259 aaPredicted RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 GPN3Q9UHW5 284 aaPredicted RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 SNX8Q9Y5X2 465 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 SORBS2O94875 1100 aaKnown RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 KLK3P07288 261 aaPredicted RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 TGM1P22735 817 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 PIGAP37287 484 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 CRYBA2P53672 197 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 RPP38P78345 283 aaKnown RBP6.68□□□□□ -1.34
NUP43-201ENST00000340413 FUT5Q11128 374 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 SLC13A2Q13183 592 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 TRIP10Q15642 601 aa6.68□□□□□ -1.34
NUP43-201ENST00000340413 DCST2Q5T1A1 773 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms