RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TMEM196Q5HYL7 178 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF367Q7RTV3 350 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 LINC00615Q96LM1 132 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 NAA50Q9GZZ1 169 aaKnown RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 OR52A5Q9H2C5 316 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ANKRA2Q9H9E1 313 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 SEC14L4Q9UDX3 406 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TSC22D2O75157 780 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 CFIP05156 583 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 PRKAR1AP10644 381 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 CDRT4Q8N9R6 151 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 SLC38A5Q8WUX1 472 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TAMM41Q96BW9 452 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TMED9Q9BVK6 235 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 SESN1Q9Y6P5 492 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 MYO7AQ13402 2215 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 NUP214P35658 2090 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TCRBV5S2A0A599 114 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TAF4O00268 1085 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 LDB3O75112 727 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 MTNR1AP48039 350 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ARHGAP40Q5TG30 622 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 OSTF1Q92882 214 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 OR4K3Q96R72 315 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TMEM168Q9H0V1 697 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 MASP1P48740 699 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TAF13Q15543 124 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ABHD17CQ6PCB6 329 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 IZUMO1Q8IYV9 350 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 PLXNA1Q9UIW2 1896 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TCTE1Q5JU00 501 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 FAM83HQ6ZRV2 1179 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 UTS2BQ765I0 119 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 LAS2Q8IYD9 372 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 GATSQ8NAP1 163 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 OR13H1Q8NG92 308 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ZDHHC1Q8WTX9 485 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 CAPSLQ8WWF8 208 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 FGF14Q92915 247 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 NELL2Q99435 816 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 S100A13Q99584 98 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 COQ7Q99807 217 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TPRP12270 2363 aaKnown RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 GADD45AP24522 165 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TSFMP43897 325 aaKnown RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 GBX2P52951 348 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 METAP1P53582 386 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 DSG2Q14126 1118 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 AKAP14Q86UN6 197 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 VRK2Q86Y07 508 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 MCATQ8IVS2 390 aaKnown RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 UXS1Q8NBZ7 420 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 PCDHGB1Q9Y5G3 927 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ASPDHA6ND91 283 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 CPNE3O75131 537 aaKnown RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ETHE1O95571 254 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 GPR75O95800 540 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 DHFRP00374 187 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF750Q32MQ0 723 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF385BQ569K4 471 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 IDNKQ5T6J7 187 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TUBA3EQ6PEY2 450 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 WDR20Q8TBZ3 569 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ELSPBP1Q96BH3 223 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ZFP3Q96NJ6 502 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 SGPP1Q9BX95 441 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 LGR4Q9BXB1 951 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 J3QLW9 94 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 VILLO15195 856 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 CISD3P0C7P0 127 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF19P17023 458 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 C21orf33P30042 268 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 NRG3P56975 720 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TAS2R43P59537 309 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 PPP2R2BQ00005 443 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 CEP78Q5JTW2 689 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ARL9Q6T311 187 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 SLC41A3Q96GZ6 507 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 SH3YL1Q96HL8 342 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 PADI2Q9Y2J8 665 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 FAM221BA6H8Z2 402 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF701M0R085 212 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ARL6IP5O75915 188 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 MNDAP41218 407 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 REEP5Q00765 189 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TSC22D1Q15714 1073 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 RNASE12Q5GAN4 147 aaKnown RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 IQCF1Q8N6M8 205 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 OR9A4Q8NGU2 314 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 PIGBOS1A0A0B4J2F0 54 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 CASC3O15234 703 aaKnown RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 RENP00797 406 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ITGAMP11215 1152 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 ACSL1P33121 698 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 OMPP47874 163 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TIAL1Q01085 375 aaKnown RBP eCLIP5.94□□□□□ -1.467e-6■■□□□ 11.9
PRKDC-202ENST00000338368 OR2A1Q8NGT9 310 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 MS4A4EQ96PG1 132 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 PELOQ9BRX2 385 aaKnown RBP5.94□□□□□ -1.46
PRKDC-202ENST00000338368 TMEM121BQ9BXQ6 578 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms