RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 KLHL3Q9UH77 587 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 IFT52Q9Y366 437 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 CHST2Q9Y4C5 530 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 SGK494L7N484 410 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 DSCR3O14972 297 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 SERPINB7O75635 380 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 UGT2B7P16662 529 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 CSNK2A2P19784 350 aaPredicted RBP8.3□□□□□ -1.08
SNCA-201ENST00000336904 AZGP1P25311 298 aaKnown RBP8.3□□□□□ -1.08
SNCA-201ENST00000336904 CSTF1Q05048 431 aaKnown RBP8.3□□□□□ -1.08
SNCA-201ENST00000336904 ENPP2Q13822 863 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 INSL4Q14641 139 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 CCDC85BQ15834 202 aaPredicted RBP8.3□□□□□ -1.08
SNCA-201ENST00000336904 ZIC1Q15915 447 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 DGUOKQ16854 277 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 TRIM16LQ309B1 348 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 LIPKQ5VXJ0 399 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 SLC48A1Q6P1K1 146 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 SMARCD3Q6STE5 483 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 Q6ZNX1 250 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 SLC22A18ASQ8N1D0 253 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 CYP4Z2PQ8N1L4 340 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 OR8D4Q8NGM9 314 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 FAM3CQ92520 227 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 ELP4Q96EB1 424 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 SLC35A4Q96G79 324 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 ART5Q96L15 291 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 MGLLQ99685 303 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 SLC38A1Q9H2H9 487 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 SACM1LQ9NTJ5 587 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 DZANK1Q9NVP4 752 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 CLCA2Q9UQC9 943 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 GPC6Q9Y625 555 aaPredicted RBP8.3□□□□□ -1.08
SNCA-201ENST00000336904 AP1M2Q9Y6Q5 423 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 A0A087WUU8 490 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 B4DGG1 531 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 PEX12O00623 359 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 ARHGAP33O14559 1287 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 CTDSP2O14595 271 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 SLC22A1O15245 554 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 GMFGO60234 142 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 KIAA0513O60268 411 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 NR2F6P10588 404 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 LTBRP36941 435 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 RGS6P49758 472 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 CAV3P56539 151 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 VSX2P58304 361 aaPredicted RBP8.3□□□□□ -1.08
SNCA-201ENST00000336904 CXCR4P61073 352 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 ZNF91Q05481 1191 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 SSX1Q16384 188 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 RGS21Q2M5E4 152 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 ASPGQ86U10 573 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 TMEM255BQ8WV15 326 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 RSC1A1Q92681 617 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 LRR1Q96L50 414 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 WDR92Q96MX6 357 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 DACH2Q96NX9 599 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 TSSK6Q9BXA6 273 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 S1PR5Q9H228 398 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 IL21RQ9HBE5 538 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 AKIP1Q9NQ31 210 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 C14orf119Q9NWQ9 140 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 CLN6Q9NWW5 311 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 OBP2AQ9NY56 170 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 PCDHGB1Q9Y5G3 927 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 ZNF780BQ9Y6R6 833 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 HSPE1-MOB4S4R3N1 261 aa8.3□□□□□ -1.08
SNCA-201ENST00000336904 RGS5O15539 181 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SSX4O60224 188 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 TP53P04637 393 aaPredicted RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 OSMP13725 252 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 GABRG2P18507 467 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 HSD17B2P37059 387 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 FRKP42685 505 aaPredicted RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 KHKP50053 298 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SRP54P61011 504 aaKnown RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 DMPKQ09013 629 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SNAPC1Q16533 368 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SLC35F1Q5T1Q4 408 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 DGAT2L6Q6ZPD8 337 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ZAR1Q86SH2 424 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 KRT73Q86Y46 540 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 NRROSQ86YC3 692 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 MFSD4AQ8N468 514 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 BBS1Q8NFJ9 593 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 NLGN4YQ8NFZ3 816 aaPredicted RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 IPCEF1Q8WWN9 437 aaPredicted RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 KLHL6Q8WZ60 621 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 OR2A14Q96R47 310 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 TBX5Q99593 518 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 MED20Q9H944 212 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 CCNB1IP1Q9NPC3 277 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 GIMAP4Q9NUV9 329 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 EHD3Q9NZN3 535 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 KCND3Q9UK17 655 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SLC13A4Q9UKG4 626 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 CES1P1Q9UKY3 287 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ERGIC3Q9Y282 383 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 FAM170BA6NMN3 283 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 HRKO00198 91 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms