RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 YIPF4Q9BSR8 244 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 LMF2Q9BU23 707 aaKnown RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 DEFB126Q9BYW3 111 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 TRIM8Q9BZR9 551 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 LHPPQ9H008 270 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 NXF5Q9H1B4 397 aaKnown RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 EQTNQ9NQ60 294 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 PRODH2Q9UF12 536 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 GPR55Q9Y2T6 319 aaPredicted RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 USP24Q9UPU5 2620 aa16.21■□□□□ 0.18
CHGA-202ENST00000334654 C2orf92A0A1B0GVN3 265 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 PPICP45877 212 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 CORO7P57737 925 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 SELPLGQ14242 412 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 FCRLBQ6BAA4 426 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 NANOGP8Q6NSW7 305 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 ZCCHC12Q6PEW1 402 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 BHLHB9Q6PI77 547 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 SLC29A4Q7RTT9 530 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 RNF130Q86XS8 419 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 PNPT1Q8TCS8 783 aaKnown RBP16.2■□□□□ 0.18
CHGA-202ENST00000334654 ROPN1LQ96C74 230 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 CRELD1Q96HD1 420 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 BTBD9Q96Q07 612 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 ACTRT3Q9BYD9 372 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 NANOGQ9H9S0 305 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 CFL2Q9Y281 166 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 KCNE3Q9Y6H6 103 aa16.2■□□□□ 0.18
CHGA-202ENST00000334654 CEACAM4O75871 244 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 NKX2-2O95096 273 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 NADKO95544 446 aaPredicted RBP16.19■□□□□ 0.18
CHGA-202ENST00000334654 ESRRAP11474 423 aaPredicted RBP16.19■□□□□ 0.18
CHGA-202ENST00000334654 DRD5P21918 477 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 MATN1P21941 496 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 SLC6A2P23975 617 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 ITGA3P26006 1051 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 SOX11P35716 441 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 CHI3L1P36222 383 aaPredicted RBP16.19■□□□□ 0.18
CHGA-202ENST00000334654 NUDT2P50583 147 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 DUSP5Q16690 384 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 B3GNTL1Q67FW5 361 aaPredicted RBP16.19■□□□□ 0.18
CHGA-202ENST00000334654 CDC73Q6P1J9 531 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 SIRT6Q8N6T7 355 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 HORMAD2Q8N7B1 307 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 CDRT4Q8N9R6 151 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 C17orf47Q8NEP4 570 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 OR52N2Q8NGI0 321 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 OR5L2Q8NGL0 311 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 TP53INP1Q96A56 240 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 OTUB1Q96FW1 271 aaPredicted RBP16.19■□□□□ 0.18
CHGA-202ENST00000334654 SLC35A4Q96G79 324 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 SLC35G5Q96KT7 338 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 CNTNAP3BQ96NU0 1288 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 CNTNAP3Q9BZ76 1288 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 GID8Q9NWU2 228 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 MYOTQ9UBF9 498 aa16.19■□□□□ 0.18
CHGA-202ENST00000334654 EXPH5Q8NEV8 1989 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 A8MUI8 341 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 KRT75O95678 551 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 GPX2P18283 190 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 CALB2P22676 271 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 CPOXP36551 454 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 CCL11P51671 97 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 MLF1P58340 268 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 DCAF7P61962 342 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 AP2B1P63010 937 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 CXADRP78310 365 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 ZNF155Q12901 538 aaPredicted RBP16.18■□□□□ 0.18
CHGA-202ENST00000334654 BNIP1Q12981 228 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 RGNQ15493 299 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 PIGGQ5H8A4 983 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 RABL3Q5HYI8 236 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.18■□□□□ 0.18
CHGA-202ENST00000334654 RPS19BP1Q86WX3 136 aaKnown RBP16.18■□□□□ 0.18
CHGA-202ENST00000334654 OR4N2Q8NGD1 307 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 OR5D16Q8NGK9 328 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 FBXO30Q8TB52 745 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 APOBEC4Q8WW27 367 aaKnown RBP16.18■□□□□ 0.18
CHGA-202ENST00000334654 LCORQ96JN0 433 aaPredicted RBP16.18■□□□□ 0.18
CHGA-202ENST00000334654 OR7D2Q96RA2 312 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 GAL3ST4Q96RP7 486 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 LMF1Q96S06 567 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 OR51I1Q9H343 314 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 PIGUQ9H490 435 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 CDCP1Q9H5V8 836 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 ZNF552Q9H707 407 aaPredicted RBP16.18■□□□□ 0.18
CHGA-202ENST00000334654 GIN1Q9NXP7 522 aa16.18■□□□□ 0.18
CHGA-202ENST00000334654 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.18■□□□□ 0.18
CHGA-202ENST00000334654 PRAMEF27A3QJZ7 478 aa16.17■□□□□ 0.18
CHGA-202ENST00000334654 A6NL46 340 aa16.17■□□□□ 0.18
CHGA-202ENST00000334654 WWP2O00308 870 aa16.17■□□□□ 0.18
CHGA-202ENST00000334654 HMGN4O00479 90 aa16.17■□□□□ 0.18
CHGA-202ENST00000334654 TO15178 435 aa16.17■□□□□ 0.18
CHGA-202ENST00000334654 PRIM2P49643 509 aa16.17■□□□□ 0.18
CHGA-202ENST00000334654 GZMMP51124 257 aa16.17■□□□□ 0.18
CHGA-202ENST00000334654 NR0B1P51843 470 aaKnown RBP16.17■□□□□ 0.18
CHGA-202ENST00000334654 MTPNP58546 118 aa16.17■□□□□ 0.18
CHGA-202ENST00000334654 SLC25A3Q00325 362 aa16.17■□□□□ 0.18
CHGA-202ENST00000334654 ART3Q13508 389 aa16.17■□□□□ 0.18
CHGA-202ENST00000334654 NNATQ16517 81 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms