RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 OC90Q02509 493 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 TDGQ13569 410 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 HYAL4Q2M3T9 481 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ENPP7Q6UWV6 458 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF695Q8IW36 515 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 NETO1Q8TDF5 533 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 C17orf62Q9BQA9 187 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 SYT3Q9BQG1 590 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 CRB3Q9BUF7 120 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 WDR26Q9H7D7 661 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 METTL7AQ9H8H3 244 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 FNIP2Q9P278 1114 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ZDHHC11BP0C7U3 371 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 CBR1P16152 277 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 TAS2R31P59538 309 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 GALK2Q01415 458 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 EMC10Q5UCC4 262 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 DCUN1D3Q8IWE4 304 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 FBXO22Q8NEZ5 403 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 OR5D16Q8NGK9 328 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 SYNPRQ8TBG9 265 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 PINK1Q9BXM7 581 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 SLC38A1Q9H2H9 487 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 NOX3Q9HBY0 568 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ATXN7L1Q9ULK2 861 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 LOC285095A0A1B0GVY8 99 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 NME4O00746 187 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 HCRTR2O43614 444 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ACTR1BP42025 376 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 FASLGP48023 281 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 WNT4P56705 351 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ACTR1AP61163 376 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 RPS26P62854 115 aaKnown RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 RSU1Q15404 277 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ARHGAP11AQ6P4F7 1023 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 PQLC3Q8N755 202 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 OR5W2Q8NH69 310 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 HOXB13Q92826 284 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 SDSLQ96GA7 329 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF681Q96N22 645 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 CNTNAP3Q9BZ76 1288 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 UGT2A1Q9Y4X1 527 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 GAAP10253 952 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 HLA-EP13747 358 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 TNFRSF1BP20333 461 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 IL4RP24394 825 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 GABRA3P34903 492 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 POU3F4P49335 361 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 VEGFCP49767 419 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 UBE2KP61086 200 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 SP2Q02086 613 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 NFATC2Q13469 925 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 TREML2Q5T2D2 321 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 FBXL22Q6P050 247 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 KCNIP4Q6PIL6 250 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 LRRTM4Q86VH4 590 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 NUP43Q8NFH3 380 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 STEAP2Q8NFT2 490 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 HERVK_113Q902F9 699 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 LDAHQ9H6V9 325 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 HS3ST4Q9Y661 456 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 TMEM14AQ9Y6G1 99 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 ATRNL1Q5VV63 1379 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 NRP1O14786 923 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 FADS1O60427 444 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 BPIP17213 487 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 SORDQ00796 357 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 CRYZQ08257 329 aaKnown RBP9.34□□□□□ -0.91
COL4A6-201ENST00000334504 TMEM41BQ5BJD5 291 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 VARS2Q5ST30 1063 aaKnown RBP9.34□□□□□ -0.91
COL4A6-201ENST00000334504 SERPINA12Q8IW75 414 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 CCDC71LQ8N9Z2 235 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 PEBP4Q96S96 227 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 BTBD2Q9BX70 525 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 MST1RQ04912 1400 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 A6NIN4 97 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 ANKRD66B4E2M5 251 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 KRBOX1C9JBD0 128 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 PRSS44E7EML9 344 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 POP7O75817 140 aaKnown RBP9.34□□□□□ -0.91
COL4A6-201ENST00000334504 PPP3CBP16298 524 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 PGGT1BP53609 377 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 MAP4K2Q12851 820 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 KEAP1Q14145 624 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 ALDH16A1Q8IZ83 802 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 OR9A1PQ8NGU1 263 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 OR52P1PQ8NH57 321 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 GIMAP1Q8WWP7 306 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 PSD2Q9BQI7 771 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 HINT2Q9BX68 163 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 RLIMQ9NVW2 624 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 SYN3O14994 580 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 MSCO60682 206 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 MRPS14O60783 128 aaKnown RBP9.34□□□□□ -0.91
COL4A6-201ENST00000334504 TRAPPC6AO75865 159 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 KCNC3Q14003 757 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 GK3PQ14409 553 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 DHCR24Q15392 516 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 PROX2Q3B8N5 592 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 FCRLBQ6BAA4 426 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms