RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 DHRS1Q96LJ7 313 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 OR2M4Q96R27 311 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 SPTBP11277 2137 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 A0A087WUU8 490 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 ZIC2O95409 532 aaPredicted RBP17.78■□□□□ 0.44
RFTN1-201ENST00000334133 FHP07954 510 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 TRHRP34981 398 aaPredicted RBP17.78■□□□□ 0.44
RFTN1-201ENST00000334133 TRA2BP62995 288 aaKnown RBP17.78■□□□□ 0.44
RFTN1-201ENST00000334133 MLC1Q15049 377 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 SNAPC1Q16533 368 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 CCNJQ5T5M9 372 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 KIAA1324Q6UXG2 1013 aaKnown RBP17.78■□□□□ 0.44
RFTN1-201ENST00000334133 MTSS1LQ765P7 747 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 PRICKLE2Q7Z3G6 844 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 PARP16Q8N5Y8 322 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 FAM46AQ96IP4 442 aaKnown RBP17.78■□□□□ 0.44
RFTN1-201ENST00000334133 SLC38A1Q9H2H9 487 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 POLMQ9NP87 494 aaPredicted RBP17.78■□□□□ 0.44
RFTN1-201ENST00000334133 CNOT2Q9NZN8 540 aaKnown RBP17.78■□□□□ 0.44
RFTN1-201ENST00000334133 A0A1W2PRQ8 180 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 CYP7B1O75881 506 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 OXSR1O95747 527 aaPredicted RBP17.77■□□□□ 0.44
RFTN1-201ENST00000334133 S100A5P33763 92 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 MPIP34949 423 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 GIPRP48546 466 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 PDX1P52945 283 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 SPHARQ15513 63 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 C16orf62Q7Z3J2 963 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 POC5Q8NA72 575 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 MORN4Q8NDC4 146 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 TMEM80Q96HE8 168 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 RAB11FIP5Q9BXF6 653 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 POLR2J2Q9GZM3 115 aaKnown RBP17.77■□□□□ 0.44
RFTN1-201ENST00000334133 SRMSQ9H3Y6 488 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 SEMA4GQ9NTN9 838 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 GSAPA4D1B5 854 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 PVRP15151 417 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 POLR2CP19387 275 aaPredicted RBP17.77■□□□□ 0.44
RFTN1-201ENST00000334133 GSTM5P46439 218 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 HYAL1Q12794 435 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 ZNF542PQ5EBM4 170 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 LYSMD2Q8IV50 215 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 OR8J1Q8NGP2 316 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 BBS10Q8TAM1 723 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 YARS2Q9Y2Z4 477 aaKnown RBP17.77■□□□□ 0.44
RFTN1-201ENST00000334133 CHST2Q9Y4C5 530 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 ZNF780BQ9Y6R6 833 aa17.77■□□□□ 0.44
RFTN1-201ENST00000334133 P2RX6O15547 441 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 PCYT1AP49585 367 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 SNRPGP62308 76 aaKnown RBP17.76■□□□□ 0.43
RFTN1-201ENST00000334133 TGM3Q08188 693 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 SYT14P1Q58G82 188 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 ATAT1Q5SQI0 421 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 OR2G6Q5TZ20 316 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 OR7G2Q8NG99 324 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 SIPA1Q96FS4 1042 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 NUAK2Q9H093 628 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 SLC13A4Q9UKG4 626 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 CENPVL1A0A0U1RR11 272 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 PRR19A6NJB7 356 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 RGS5O15539 181 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 CTSVO60911 334 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 UPK1BO75841 260 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 PORP16435 677 aaPredicted RBP17.76■□□□□ 0.43
RFTN1-201ENST00000334133 CSTF2P33240 577 aaKnown RBP eCLIP17.76■□□□□ 0.43
RFTN1-201ENST00000334133 AHRP35869 848 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 CD97P48960 835 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 PRR5P85299 388 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 TEKQ02763 1124 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 PRRT3Q5FWE3 981 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 SDE2Q6IQ49 451 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 ZNF425Q6IV72 752 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 ZNF761Q86XN6 746 aaPredicted RBP17.76■□□□□ 0.43
RFTN1-201ENST00000334133 MFSD9Q8NBP5 474 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 C9orf43Q8TAL5 461 aaPredicted RBP17.76■□□□□ 0.43
RFTN1-201ENST00000334133 CDS1Q92903 461 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 PPP1R14BQ96C90 147 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 CAPN10Q9HC96 672 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 SNTG1Q9NSN8 517 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 C14orf119Q9NWQ9 140 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.76■□□□□ 0.43
RFTN1-201ENST00000334133 SYNDIG1LA6NDD5 238 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 EMC8O43402 210 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 SPNP16150 400 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 RPS19P39019 145 aaKnown RBP17.76■□□□□ 0.43
RFTN1-201ENST00000334133 SMIM11AP58511 58 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 MFSD4BQ5TF39 518 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 PRSS41Q7RTY9 318 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 NKAIN4Q8IVV8 208 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 OR8D4Q8NGM9 314 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 SLC35A4Q96G79 324 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 PRRC1Q96M27 445 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 ZNF681Q96N22 645 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 GIMAP4Q9NUV9 329 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 ERVK13-1Q9NX77 482 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 COLEC10Q9Y6Z7 277 aa17.76■□□□□ 0.43
RFTN1-201ENST00000334133 LOC105369274A0A096LPK9 316 aa17.75■□□□□ 0.43
RFTN1-201ENST00000334133 LOC102723532A0A0G2JNH3 316 aa17.75■□□□□ 0.43
RFTN1-201ENST00000334133 FAM170BA6NMN3 283 aa17.75■□□□□ 0.43
RFTN1-201ENST00000334133 NR2F6P10588 404 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms