RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 RNF111Q6ZNA4 994 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 PACRGLQ8N7B6 248 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 THAP4Q8WY91 577 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 NCLNQ969V3 563 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 FKBP10Q96AY3 582 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 AMDHD1Q96NU7 426 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 BTBD9Q96Q07 612 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 BDH2Q9BUT1 245 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 FAM117AQ9C073 453 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 ING2Q9H160 280 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 PIF1Q9H611 641 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 C3orf14Q9HBI5 128 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 TRPC4Q9UBN4 977 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 FBXW2Q9UKT8 454 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 AURKCQ9UQB9 309 aa15.35■□□□□ 0.05
PDLIM1-201ENST00000329399 IGLV3-12A0A075B6K2 115 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 TMEM247A6NEH6 219 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 ZNF860A6NHJ4 632 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 SOCS6O14544 535 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 DEAF1O75398 565 aaPredicted RBP15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 TNFRSF21O75509 655 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 NCK1P16333 377 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 FBLP22087 321 aaKnown RBP15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 KDELR2P33947 212 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 CRATP43155 626 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 ERFP50548 548 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 LIM2P55344 173 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 PRR5P85299 388 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 GAB1Q13480 694 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 DSG2Q14126 1118 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 DEFB134Q4QY38 66 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 KIRREL2Q6UWL6 708 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 CCDC80Q76M96 950 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 PTOV1Q86YD1 416 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 APLFQ8IW19 511 aaPredicted RBP15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 OR4K14Q8NGD5 310 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 OR5T3Q8NGG3 340 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 OR56A1Q8NGH5 318 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 PKP2Q99959 881 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 MAPKAP1Q9BPZ7 522 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 YIPF2Q9BWQ6 316 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 WDR54Q9H977 334 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 AGPAT4Q9NRZ5 378 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 GMPR2Q9P2T1 348 aaKnown RBP15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 HS3ST3B1Q9Y662 390 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 SCN2AQ99250 2005 aa15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 TNRC6AQ8NDV7 1962 aaKnown RBP15.34■□□□□ 0.05
PDLIM1-201ENST00000329399 A0A0G2JN53 185 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 RNF103-CHMP3A0A140T963 221 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 A6NL46 340 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 GPC1P35052 558 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 SOAT1P35610 550 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 CCT3P49368 545 aaKnown RBP15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 NCBP2P52298 156 aaKnown RBP eCLIP15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 MVDP53602 400 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 NFATC3Q12968 1075 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 ATP6AP1Q15904 470 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 ADRM1Q16186 407 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 SPDYE7PQ495Y7 208 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 ZC3H7AQ8IWR0 971 aaKnown RBP15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 ICA1LQ8NDH6 482 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 C8orf44Q96CB5 159 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 MVB12AQ96EY5 273 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 PYURFQ96I23 114 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 TACO1Q9BSH4 297 aaKnown RBP15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 TRIM4Q9C037 500 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 CXorf36Q9H7Y0 433 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 ADPRHL2Q9NX46 363 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 P4HTMQ9NXG6 502 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 HCN3Q9P1Z3 774 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 MRPS33Q9Y291 106 aaKnown RBP15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 PADI2Q9Y2J8 665 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 NAALAD2Q9Y3Q0 740 aa15.33■□□□□ 0.05
PDLIM1-201ENST00000329399 DOCK10Q96BY6 2186 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 TENM4Q6N022 2769 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 PGRMC2O15173 223 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 RDH16O75452 317 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 NSA2O95478 260 aaKnown RBP15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 AGR2O95994 175 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 LDLRP01130 860 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 FHP07954 510 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 ATP6V1C1P21283 382 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 MMP11P24347 488 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 RAB38P57729 211 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 OLR1P78380 273 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 RAPSNQ13702 412 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 PRSS53Q2L4Q9 553 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 ANGPTL8Q6UXH0 198 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 EIF3MQ7L2H7 374 aaKnown RBP15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 PATL1Q86TB9 770 aaKnown RBP15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 LILRA2Q8N149 483 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 LRRC25Q8N386 305 aaPredicted RBP15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 MIPOL1Q8TD10 442 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 EME1Q96AY2 570 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 ZNF681Q96N22 645 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 C9orf16Q9BUW7 83 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 CHID1Q9BWS9 393 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 OSBPL10Q9BXB5 764 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 SLC25A18Q9H1K4 315 aa15.33■□□□□ 0.04
PDLIM1-201ENST00000329399 GLIPR2Q9H4G4 154 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms