RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ZNF776Q68DI1 518 aaPredicted RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 KIAA1211LQ6NV74 962 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 TSTD1Q8NFU3 115 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 SUSD3Q96L08 255 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 AGAP4Q96P64 663 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 SLC2A11Q9BYW1 496 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 B4GALT7Q9UBV7 327 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 SCAMP2O15127 329 aaKnown RBP16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 RBMS1P29558 406 aaKnown RBP16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 LRFN4Q6PJG9 635 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 SORCS1Q8WY21 1168 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 KRBA1A5PL33 1030 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 WNT4P56705 351 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 HMGN3Q15651 99 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 TMEM185AQ8NFB2 350 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 SOX17Q9H6I2 414 aaPredicted RBP16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 ARID1AO14497 2285 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 KNL1Q8NG31 2342 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 CA5AP35218 305 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 OPRL1P41146 370 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF648Q5T619 568 aaPredicted RBP16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 DESI1Q6ICB0 168 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 NAA11Q9BSU3 229 aaPredicted RBP16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 BEST1O76090 585 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 AKAIN1P0CW23 69 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 SHMT2P34897 504 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 PRSS3P35030 304 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 DIO3P55073 304 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 GALEQ14376 348 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 CLDN19Q8N6F1 224 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 CELF5Q8N6W0 485 aaKnown RBP16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 KREMEN2Q8NCW0 462 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 GPATCH2Q9NW75 528 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 RAB19A4D1S5 217 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 INPPL1O15357 1258 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 ALDOAP04075 364 aaKnown RBP16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 C6P13671 934 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 GRPRP30550 384 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 GALNT10Q86SR1 603 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF695Q8IW36 515 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 OR52P1PQ8NH57 321 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 SLC6A5Q9Y345 797 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 ASGR2P07307 311 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 RCAN2Q14206 197 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 Q6ZVU0 165 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 CERS5Q8N5B7 392 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 RETREG1Q9H6L5 497 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 A0A0U1RQK1 487 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 KEAP1Q14145 624 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 PRSS55Q6UWB4 352 aaPredicted RBP16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 TMEM107Q6UX40 140 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 TREML1Q86YW5 311 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 DTX3Q8N9I9 347 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 MYLIPQ8WY64 445 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 NT5C3BQ969T7 300 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 ZDHHC12Q96GR4 267 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 BTBD2Q9BX70 525 aa16.09■□□□□ 0.17
SMCHD1-201ENST00000320876 GAAP10253 952 aa16.08■□□□□ 0.17
SMCHD1-201ENST00000320876 CD1DP15813 335 aa16.08■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF783Q6ZMS7 281 aa16.08■□□□□ 0.17
SMCHD1-201ENST00000320876 TMEM150AQ86TG1 271 aa16.08■□□□□ 0.17
SMCHD1-201ENST00000320876 TBX18O95935 607 aa16.08■□□□□ 0.17
SMCHD1-201ENST00000320876 ELOAQ14241 798 aaKnown RBP16.08■□□□□ 0.17
SMCHD1-201ENST00000320876 TECRLQ5HYJ1 363 aa16.08■□□□□ 0.17
SMCHD1-201ENST00000320876 TEX19Q8NA77 164 aa16.08■□□□□ 0.17
SMCHD1-201ENST00000320876 OR8D2Q9GZM6 311 aa16.08■□□□□ 0.17
SMCHD1-201ENST00000320876 MSX1P28360 303 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 C2orf27AQ580R0 203 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 DPY19L2P1Q6NXN4 242 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 CCDC116Q8IYX3 515 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 OR51A7Q8NH64 312 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 ALG8Q9BVK2 526 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 SCAF4O95104 1147 aaKnown RBP16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 HSD17B1P14061 328 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 FLT3LGP49771 235 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 ABHD11Q8NFV4 315 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 GALK2Q01415 458 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 MELKQ14680 651 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 HACD4Q5VWC8 232 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 TRIB2Q92519 343 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 LUZP4Q9P127 313 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF808Q8N4W9 903 aaPredicted RBP16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF516Q92618 1163 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 GJE1A6NN92 205 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 DRD5P21918 477 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 CARD17Q5XLA6 110 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 FAM83FQ8NEG4 500 aaPredicted RBP16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 PLCXD1Q9NUJ7 323 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 PSAT1Q9Y617 370 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 RGPD1P0DJD0 1748 aa16.08■□□□□ 0.16
SMCHD1-201ENST00000320876 VSTM2BA6NLU5 285 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 LCKP06239 509 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 RPL17P18621 184 aaKnown RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 SFRP4Q6FHJ7 346 aaPredicted RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 OR2T4Q8NH00 348 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 SPTSSAQ969W0 71 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 LRRC46Q96FV0 321 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 YARS2Q9Y2Z4 477 aaKnown RBP16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 RHOP08100 348 aa16.07■□□□□ 0.16
SMCHD1-201ENST00000320876 TIGD5Q53EQ6 642 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms