RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 CHRNA6Q15825 494 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 CNN2Q99439 309 aaKnown RBP12.6□□□□□ -0.39
AFF3-201ENST00000317233 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 NXF5Q9H1B4 397 aaKnown RBP12.6□□□□□ -0.39
AFF3-201ENST00000317233 SCPEP1Q9HB40 452 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 PADI3Q9ULW8 664 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 SLC6A14Q9UN76 642 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 TDRD6O60522 2096 aaKnown RBP12.6□□□□□ -0.39
AFF3-201ENST00000317233 H3BMQ9 156 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 MANBAO00462 879 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 CSN1S1P47710 185 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 OR10A5Q9H207 317 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 OR10A2Q9H208 303 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 SPHKAPQ2M3C7 1700 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 SLC22A2O15244 555 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 POP7O75817 140 aaKnown RBP12.6□□□□□ -0.39
AFF3-201ENST00000317233 PEX2P28328 305 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 PHYHD1Q5SRE7 291 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 KBTBD6Q86V97 674 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 NLRP8Q86W28 1048 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 ZNF679Q8IYX0 411 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 HS3ST5Q8IZT8 346 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 BPIFCQ8NFQ6 507 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 OR9A1PQ8NGU1 263 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 AURKBQ96GD4 344 aaPredicted RBP12.6□□□□□ -0.39
AFF3-201ENST00000317233 OAZ3Q9UMX2 235 aa12.6□□□□□ -0.39
AFF3-201ENST00000317233 TMEM184BQ9Y519 407 aaPredicted RBP12.6□□□□□ -0.39
AFF3-201ENST00000317233 OR12D1P0DN82 309 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 KDELR2P33947 212 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 CHRNEQ04844 493 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 QPCTQ16769 361 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 ZNF404Q494X3 552 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 CTSL3PQ5NE16 218 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 PRAMEF8Q5VWM4 474 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 PRAMEF7Q5VXH5 474 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 CDHR3Q6ZTQ4 885 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 MRPL38Q96DV4 380 aaKnown RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 MCHR1Q99705 422 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 TSPAN11A1L157 253 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 MMP20O60882 483 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 CTRB1P17538 263 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 ACY1Q03154 408 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 LIPKQ5VXJ0 399 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 CTRB2Q6GPI1 263 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 ACBD6Q9BR61 282 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 VPS25Q9BRG1 176 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 L2HGDHQ9H9P8 463 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 PRELID3BQ9Y3B1 194 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 MED14O60244 1454 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 B4DXG7 233 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 CRYBA1P05813 215 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 OR4Q2P0C623 313 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 EFNA3P52797 238 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 ZNF705AQ6ZN79 300 aaPredicted RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 BANPQ8N9N5 519 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 ZFP90Q8TF47 636 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 SSUH2Q9Y2M2 353 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 OR7A17O14581 309 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 IDH3AP50213 366 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 RAC1P63000 192 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 COQ5Q5HYK3 327 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 PLCXD3Q63HM9 321 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 ARHGAP11AQ6P4F7 1023 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 GCNT2Q8N0V5 402 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 OR4K1Q8NGD4 311 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 FNDC9Q8TBE3 224 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 NDRG1Q92597 394 aaKnown RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 INTS12Q96CB8 462 aaKnown RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 OR5B2Q96R09 309 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 HES7Q9BYE0 225 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 PLAGL1Q9UM63 463 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 RNGTTO60942 597 aaKnown RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 GBAP04062 536 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 DCNP07585 359 aaKnown RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 PORP16435 677 aaPredicted RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 IL2RGP31785 369 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 ACVR1BP36896 505 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 PTTG1IPP53801 180 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 ADARB1P78563 741 aaKnown RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 UPP1Q16831 310 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 SMG8Q8ND04 991 aaKnown RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 OR13C9Q8NGT0 318 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 SARDHQ9UL12 918 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 ALOX15BO15296 676 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 BEST1O76090 585 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 CHRM4P08173 479 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 IDO2Q6ZQW0 420 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 EGFL6Q8IUX8 553 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 PSMF1Q92530 271 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 TTYH3Q9C0H2 523 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 TP63Q9H3D4 680 aaPredicted RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 EIF2B3Q9NR50 452 aaKnown RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 A2ML1A8K2U0 1454 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 NCBP2LA6PVI3 153 aaKnown RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 LGALS8O00214 317 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 CDK2AP1O14519 115 aa12.59□□□□□ -0.39
AFF3-201ENST00000317233 TPT1P13693 172 aaKnown RBP12.59□□□□□ -0.39
AFF3-201ENST00000317233 AQP4P55087 323 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms