RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 DEFB133Q30KQ1 61 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 FHL5Q5TD97 284 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 FAM92BQ6ZTR7 304 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 CCDC103Q8IW40 242 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 DNAJC22Q8N4W6 341 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 COG8Q96MW5 612 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 DGCR6LQ9BY27 220 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 TBC1D17Q9HA65 648 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 ZNF226Q9NYT6 803 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 CALML5Q9NZT1 146 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 CLCA2Q9UQC9 943 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 PCDHGB1Q9Y5G3 927 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 PCDHGA10Q9Y5H3 936 aa17.19■□□□□ 0.34
CCDC43-201ENST00000315286 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 AQP9O43315 295 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 OR10H3O60404 316 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 TPST2O60704 377 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 SDC3O75056 442 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 UGT2B17O75795 530 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 OXSR1O95747 527 aaPredicted RBP17.18■□□□□ 0.34
CCDC43-201ENST00000315286 ATP1B1P05026 303 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 ITIH1P19827 911 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 NT5EP21589 574 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 BCKDHBP21953 392 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 CHMP24386 653 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 NXPH1P58417 271 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 SMIM11AP58511 58 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 DUSP5Q16690 384 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 MLIPQ5VWP3 458 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 TMEM236Q5W0B7 351 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 CWF19L1Q69YN2 538 aaKnown RBP17.18■□□□□ 0.34
CCDC43-201ENST00000315286 TANKQ92844 425 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 PRR14Q9BWN1 585 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 UCK1Q9HA47 277 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 ANKHQ9HCJ1 492 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 C19orf53Q9UNZ5 99 aaPredicted RBP17.18■□□□□ 0.34
CCDC43-201ENST00000315286 GPR55Q9Y2T6 319 aaPredicted RBP17.18■□□□□ 0.34
CCDC43-201ENST00000315286 CHST2Q9Y4C5 530 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 EML5Q05BV3 1969 aa17.18■□□□□ 0.34
CCDC43-201ENST00000315286 A0A1W2PRQ8 180 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 SH3PXD2BA1X283 911 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 MED26O95402 600 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 ADAP00813 363 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 ACP2P11117 423 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 MAP2K4P45985 399 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 CSNK1EP49674 416 aaKnown RBP17.17■□□□□ 0.34
CCDC43-201ENST00000315286 MAPK10P53779 464 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 CRISP1P54107 249 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 DGCR6Q14129 220 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 PRTGQ2VWP7 1150 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 C17orf82Q86X59 251 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-201ENST00000315286 P3H2Q8IVL5 708 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 CAMKK1Q8N5S9 505 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 FAR1Q8WVX9 515 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 ANKRD9Q96BM1 317 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-201ENST00000315286 FNDC11Q9BVV2 318 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 ADAP2Q9NPF8 381 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 CTPS2Q9NRF8 586 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 MAN2C1Q9NTJ4 1040 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 REV1Q9UBZ9 1251 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 FTSJ1Q9UET6 329 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 ENOPH1Q9UHY7 261 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 MKLN1Q9UL63 735 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 SLC6A14Q9UN76 642 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 MGAT4BQ9UQ53 548 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 HEMK1Q9Y5R4 338 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-201ENST00000315286 LILRA5A6NI73 299 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 CHST10O43529 356 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 FOSL2P15408 326 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 GABRB1P18505 474 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 GP2P55259 537 aaKnown RBP17.17■□□□□ 0.34
CCDC43-201ENST00000315286 RAB38P57729 211 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 PGBD2Q6P3X8 592 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 PODNL1Q6PEZ8 512 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 FRRS1Q6ZNA5 592 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-201ENST00000315286 UCK2Q9BZX2 261 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 UCKL1Q9NWZ5 548 aa17.17■□□□□ 0.34
CCDC43-201ENST00000315286 A0A0A6YYC8 382 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-201ENST00000315286 ZAR1LA6NP61 321 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 LMO7DNF2Z398 122 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 TMX2-CTNND1H3BSU7 103 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 I3L1I5 382 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-201ENST00000315286 M0R129 80 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 SYT5O00445 386 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 FRS3O43559 492 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 RGS10O43665 173 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 SRPX2O60687 465 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-201ENST00000315286 AGR2O95994 175 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 MT-ND2P03891 347 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 POU1F1P28069 291 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 HNRNPKP61978 463 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC43-201ENST00000315286 CSNK2BP67870 215 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 HPCAP84074 193 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 MGAT2Q10469 447 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 PRICKLE4Q2TBC4 344 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 AHSA2Q719I0 299 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 DEPDC4Q8N2C3 294 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 OR52P1PQ8NH57 321 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 CLDN23Q96B33 292 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms