RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 XKP51811 444 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 ARF3P61204 181 aaPredicted RBP11.67□□□□□ -0.54
RNF4-201ENST00000314289 RPS15AP62244 130 aaKnown RBP11.67□□□□□ -0.54
RNF4-201ENST00000314289 TRA2BP62995 288 aaKnown RBP11.67□□□□□ -0.54
RNF4-201ENST00000314289 CHRNEQ04844 493 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 PTGES3Q15185 160 aaKnown RBP11.67□□□□□ -0.54
RNF4-201ENST00000314289 ZNF605Q86T29 641 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 SLC16A11Q8NCK7 471 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 OR7G2Q8NG99 324 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 OR6T1Q8NGN1 323 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 MCFD2Q8NI22 146 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 KLHL6Q8WZ60 621 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 SLC9A6Q92581 669 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 IL4I1Q96RQ9 567 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 ZNF607Q96SK3 696 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 C6orf62Q9GZU0 229 aaPredicted RBP11.67□□□□□ -0.54
RNF4-201ENST00000314289 TPK1Q9H3S4 243 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 FBXO8Q9NRD0 319 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 EHD3Q9NZN3 535 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 PCOLCE2Q9UKZ9 415 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 MKLN1Q9UL63 735 aa11.67□□□□□ -0.54
RNF4-201ENST00000314289 SNPHO15079 494 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 PPP2R1BP30154 601 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 CTSKP43235 329 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 VSX2P58304 361 aaPredicted RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 FZD2Q14332 565 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 SYT16Q17RD7 645 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 BCDIN3DQ7Z5W3 292 aaKnown RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 VRK2Q86Y07 508 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 TMEM52Q8NDY8 209 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 ASB12Q8WXK4 309 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 ELP4Q96EB1 424 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 ZHX1-C8orf76Q96EF9 292 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 ZNF681Q96N22 645 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 OR7D2Q96RA2 312 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 GABARAPL3Q9BY60 117 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 NDEL1Q9GZM8 345 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 NECTIN3Q9NQS3 549 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 USP36Q9P275 1121 aaKnown RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 NTNG1Q9Y2I2 539 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 TPRKBQ9Y3C4 175 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 OR2W5A6NFC9 320 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 PRAMEF26H0Y7S4 382 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 HOXC4P09017 264 aaPredicted RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 ANXA8P13928 327 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 GGT2P36268 569 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 CLK1P49759 484 aaKnown RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 MAZP56270 477 aaKnown RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 CCNJQ5T5M9 372 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 SRFBP1Q8NEF9 429 aaKnown RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 SLC7A13Q8TCU3 470 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 SLC22A18Q96BI1 424 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 LGALS12Q96DT0 336 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 RNF31Q96EP0 1072 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 ZNF354BQ96LW1 612 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 DUSP21Q9H596 190 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 LMAN1LQ9HAT1 526 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 IL21RQ9HBE5 538 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 FAM60AQ9NP50 221 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 POLMQ9NP87 494 aaPredicted RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 IMPAD1Q9NX62 359 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 ZNF226Q9NYT6 803 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 GPR55Q9Y2T6 319 aaPredicted RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 NAALAD2Q9Y3Q0 740 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 H3BN98 237 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 TNFRSF10CO14798 259 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 MBTPS2O43462 519 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 RGS10O43665 173 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 S100A1P23297 94 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 LIMS1P48059 325 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 CRISP3P54108 245 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 KIR2DS3Q14952 304 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 UBXN2BQ14CS0 331 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 PROX2Q3B8N5 592 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 FBXO43Q4G163 708 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 TRMT12Q53H54 448 aaKnown RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 COL13A1Q5TAT6 717 aaPredicted RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 KIAA0895LQ68EN5 471 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 THOC7Q6I9Y2 204 aaKnown RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 ABI3BPQ7Z7G0 1075 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 GAL3ST3Q96A11 431 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 YIPF6Q96EC8 236 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 CTRCQ99895 268 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 FOXQ1Q9C009 403 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 ROGDIQ9GZN7 287 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 ZBTB20Q9HC78 741 aaPredicted RBP11.66□□□□□ -0.54
RNF4-201ENST00000314289 GIMAP4Q9NUV9 329 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 DUSP12Q9UNI6 340 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 POFUT2Q9Y2G5 429 aa11.66□□□□□ -0.54
RNF4-201ENST00000314289 COL4A2P08572 1712 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 SPTY2D1-AS1A0A0U1RR47 76 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 GUCY1B2O75343 617 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 FHP07954 510 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 CD36P16671 472 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 CHMP24386 653 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 ELAVL4P26378 380 aaKnown RBP11.65□□□□□ -0.54
RNF4-201ENST00000314289 GTF2E2P29084 291 aaKnown RBP11.65□□□□□ -0.54
RNF4-201ENST00000314289 CNR2P34972 360 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 RABIFP47224 123 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 KHKP50053 298 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms