RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 GSRP00390 522 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 SERPINE2P07093 398 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 PRPH2P23942 346 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 GLO1Q04760 184 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 C2orf76Q3KRA6 126 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 CCBE1Q6UXH8 406 aaPredicted RBP14.77□□□□□ -0.04
HCFC1-201ENST00000310441 EMID1Q96A84 441 aaPredicted RBP14.77□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF286AQ9HBT8 521 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 PREBQ9HCU5 417 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 ZDHHC18Q9NUE0 388 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 ASF1BQ9NVP2 202 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 A0A1W2PS29 197 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 BLACEA4D250 179 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 CHRNB1P11230 501 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 MSMO1Q15800 293 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 C6orf141Q5SZD1 244 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 C22orf39Q6P5X5 142 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 MINDY1Q8N5J2 469 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 FOXRED1Q96CU9 486 aaPredicted RBP14.77□□□□□ -0.04
HCFC1-201ENST00000310441 PAPOLGQ9BWT3 736 aaKnown RBP14.77□□□□□ -0.04
HCFC1-201ENST00000310441 DPEP3Q9H4B8 488 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 COL14A1Q05707 1796 aaKnown RBP14.77□□□□□ -0.04
HCFC1-201ENST00000310441 SIX3O95343 332 aaPredicted RBP14.77□□□□□ -0.05
HCFC1-201ENST00000310441 OR12D1P0DN82 309 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 TMEM139Q8IV31 216 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 NANPQ8TBE9 248 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 GPR160Q9UJ42 338 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 GRXCR1A8MXD5 290 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 GDF10P55107 478 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 ZNF92Q03936 586 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 ZNF805Q5CZA5 627 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 SNX18Q96RF0 628 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 DEFB126Q9BYW3 111 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 ATRNL1Q5VV63 1379 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 OR6C74A6NCV1 312 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 EIF3FO00303 357 aaPredicted RBP14.77□□□□□ -0.05
HCFC1-201ENST00000310441 ADORA3P0DMS8 318 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 HOXB2P14652 356 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 MYF6P23409 242 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 TEX19Q8NA77 164 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 ZNF461Q8TAF7 563 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 RPS10P5Q9NQ39 176 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 RNF11Q9Y3C5 154 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 AFF3P51826 1226 aaKnown RBP14.77□□□□□ -0.05
HCFC1-201ENST00000310441 ZNF610Q8N9Z0 462 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 OR6T1Q8NGN1 323 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 OR13C4Q8NGS5 318 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 OR1S1Q8NH92 325 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 PIGVQ9NUD9 493 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 IL20RAQ9UHF4 553 aa14.77□□□□□ -0.05
HCFC1-201ENST00000310441 GLSO94925 669 aaPredicted RBP14.76□□□□□ -0.05
HCFC1-201ENST00000310441 UBBP0CG47 229 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 UBCP0CG48 685 aaKnown RBP14.76□□□□□ -0.05
HCFC1-201ENST00000310441 SLC6A8P48029 635 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 TAS2R46P59540 309 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 RPS27AP62979 156 aaKnown RBP14.76□□□□□ -0.05
HCFC1-201ENST00000310441 UBA52P62987 128 aaKnown RBP14.76□□□□□ -0.05
HCFC1-201ENST00000310441 SPOCK1Q08629 439 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 LRRC73Q5JTD7 316 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 FBXL22Q6P050 247 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 C4orf32Q8N8J7 132 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 TFAP2BQ92481 460 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 LRR1Q96L50 414 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 REV1Q9UBZ9 1251 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 PXDNQ92626 1479 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 PHRF1Q9P1Y6 1649 aaKnown RBP14.76□□□□□ -0.05
HCFC1-201ENST00000310441 CLDN7O95471 211 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 ACRV1P26436 265 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 PYCR1P32322 319 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 SCAPQ12770 1279 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 CREB3L2Q70SY1 520 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 EGFL6Q8IUX8 553 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 OR9A2Q8NGT5 310 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 DCUN1D4Q92564 292 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 OR2M4Q96R27 311 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 LOC102725191A0A1B0GVB3 256 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 OR4Q2P0C623 313 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 ELK4P28324 431 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 PIM3Q86V86 326 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 ZNF317Q96PQ6 595 aaPredicted RBP14.76□□□□□ -0.05
HCFC1-201ENST00000310441 PLCXD1Q9NUJ7 323 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 GAAP10253 952 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 MSX1P28360 303 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 CRABP1P29762 137 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 CAV2P51636 162 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 RAET1LQ5VY80 246 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 LRFN4Q6PJG9 635 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 KLHDC7BQ96G42 594 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 SH3YL1Q96HL8 342 aaPredicted RBP14.76□□□□□ -0.05
HCFC1-201ENST00000310441 B3GALT1Q9Y5Z6 326 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 ROBO1Q9Y6N7 1651 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 PFKMP08237 780 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 AKAIN1P0CW23 69 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 GPR176Q14439 515 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 ZNF417Q8TAU3 575 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 ZFAND1Q8TCF1 268 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 ZNF536O15090 1300 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 IRS2Q9Y4H2 1338 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 GPR25O00155 361 aa14.76□□□□□ -0.05
HCFC1-201ENST00000310441 TMEM63AO94886 807 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms