RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 NME6O75414 186 aaPredicted RBP17.83■□□□□ 0.44
LIME1-201ENST00000309546 REM1O75628 298 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 BCAS2O75934 225 aaPredicted RBP17.83■□□□□ 0.44
LIME1-201ENST00000309546 PROCP04070 461 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 ANXA4P09525 319 aaPredicted RBP17.83■□□□□ 0.44
LIME1-201ENST00000309546 CAPN3P20807 821 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 DRD5P21918 477 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 PTPN6P29350 595 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 PPICP45877 212 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 ZNF763Q0D2J5 394 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 ACSF3Q4G176 576 aaPredicted RBP17.83■□□□□ 0.44
LIME1-201ENST00000309546 CFAP157Q5JU67 520 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 SLC30A6Q6NXT4 461 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 SEM1Q6ZVN7 128 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 CDH24Q86UP0 819 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 SAMD14Q8IZD0 417 aaPredicted RBP17.83■□□□□ 0.44
LIME1-201ENST00000309546 FAM9CQ8IZT9 166 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 CNPY4Q8N129 248 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 TMBIM1Q969X1 311 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 TIMP4Q99727 224 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 SLC35C2Q9NQQ7 365 aa17.83■□□□□ 0.44
LIME1-201ENST00000309546 KIAA1549Q9HCM3 1950 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 HSPB2A8KAH6 182 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 AHRRA9YTQ3 701 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 KDM4EB2RXH2 506 aaPredicted RBP17.82■□□□□ 0.44
LIME1-201ENST00000309546 SNPHO15079 494 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 ICOSLGO75144 302 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 BMP7P18075 431 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 PTGDSP41222 190 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 NAGLUP54802 743 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 CORO7P57737 925 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 HSPB2Q16082 182 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 DCST1Q5T197 706 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 GALNT18Q6P9A2 607 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 YRDCQ86U90 279 aaKnown RBP17.82■□□□□ 0.44
LIME1-201ENST00000309546 TMEM200AQ86VY9 491 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 PM20D2Q8IYS1 436 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 FAM83FQ8NEG4 500 aaPredicted RBP17.82■□□□□ 0.44
LIME1-201ENST00000309546 TNIP2Q8NFZ5 429 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 RDH11Q8TC12 318 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 EPS8L3Q8TE67 593 aaKnown RBP17.82■□□□□ 0.44
LIME1-201ENST00000309546 BBS4Q96RK4 519 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 UGT2B28Q9BY64 529 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 SHCBP1LQ9BZQ2 653 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 SERHLQ9NQF3 203 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 MIEF1Q9NQG6 463 aa17.82■□□□□ 0.44
LIME1-201ENST00000309546 GPR55Q9Y2T6 319 aaPredicted RBP17.82■□□□□ 0.44
LIME1-201ENST00000309546 POLR3HQ9Y535 204 aaPredicted RBP17.82■□□□□ 0.44
LIME1-201ENST00000309546 AKAP9Q99996 3911 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 TO15178 435 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 ERN1O75460 977 aaKnown RBP17.81■□□□□ 0.44
LIME1-201ENST00000309546 BMP5P22003 454 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 KRT20P35900 424 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 GSTM5P46439 218 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 CCT5P48643 541 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 C2orf80Q0P641 193 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 ZNF155Q12901 538 aaPredicted RBP17.81■□□□□ 0.44
LIME1-201ENST00000309546 CCDC153Q494R4 210 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 VASNQ6EMK4 673 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 TMEM81Q6P7N7 255 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 NAXEQ8NCW5 288 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 ABTB1Q969K4 478 aaPredicted RBP17.81■□□□□ 0.44
LIME1-201ENST00000309546 TMCO6Q96DC7 493 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 COL21A1Q96P44 957 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 BTBD9Q96Q07 612 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 TRIB1Q96RU8 372 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 PRDM14Q9GZV8 571 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 C12orf65Q9H3J6 166 aaKnown RBP17.81■□□□□ 0.44
LIME1-201ENST00000309546 FOLH1BQ9HBA9 442 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 KCNN3Q9UGI6 736 aa17.81■□□□□ 0.44
LIME1-201ENST00000309546 MED12Q93074 2177 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 POLQO75417 2590 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 SERTM1A2A2V5 107 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 PLIN3O60664 434 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 EPPINO95925 133 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 DDCP20711 480 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 IL12BP29460 328 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 UQCRC1P31930 480 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 GCKP35557 465 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 DLX5P56178 289 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 SNTA1Q13424 505 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 SNTB1Q13884 538 aaKnown RBP17.8■□□□□ 0.44
LIME1-201ENST00000309546 CES4AQ5XG92 561 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 FRMD7Q6ZUT3 714 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 SH2D5Q6ZV89 423 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 LACC1Q8IV20 430 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 RELL2Q8NC24 303 aaPredicted RBP17.8■□□□□ 0.44
LIME1-201ENST00000309546 OR7G2Q8NG99 324 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 OR14L1PQ8NHC6 308 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 NTNG2Q96CW9 530 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 ERP27Q96DN0 273 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 C11orf24Q96F05 449 aaPredicted RBP17.8■□□□□ 0.44
LIME1-201ENST00000309546 ADOQ96SZ5 270 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 GRID1Q9ULK0 1009 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 OTOGQ6ZRI0 2925 aa17.8■□□□□ 0.44
LIME1-201ENST00000309546 OR6C70A6NIJ9 312 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 COPEO14579 308 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 DVL2O14641 736 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 ZWINTO95229 277 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 IL2RAP01589 272 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms