RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TMEM225BP0DP42 221 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 MS4A2Q01362 244 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 CRHR2Q13324 411 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 ZNF789Q5FWF6 425 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 FIP1L1Q6UN15 594 aaKnown RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 GTPBP8Q8N3Z3 284 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 TPSD1Q9BZJ3 242 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 NAA50Q9GZZ1 169 aaKnown RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 RANGRFQ9HD47 186 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 NLE1Q9NVX2 485 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 NDUFAF4Q9P032 175 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 SPEF2Q9C093 1822 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 STC1P52823 247 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 SLC27A4Q6P1M0 643 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 NAGSQ8N159 534 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 OR4K14Q8NGD5 310 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 CREB3L1Q96BA8 519 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 DOHHQ9BU89 302 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 MROQ9BYG7 248 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 IL37Q9NZH6 218 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 BACE2Q9Y5Z0 518 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 FBXO24O75426 580 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 SCGB1D1O95968 90 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 BMP4P12644 408 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 NKX6-1P78426 367 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 PIN1Q13526 163 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 KBTBD6Q86V97 674 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 SLC30A8Q8IWU4 369 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 NRMQ8IXM6 262 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 CNTNAP3BQ96NU0 1288 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 BTBD1Q9H0C5 482 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 GGT3PA6NGU5 568 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 OR6C65A6NJZ3 312 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 ARPC1BO15143 372 aaKnown RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 OMGP23515 440 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 F8A1P23610 371 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 DLSTP36957 453 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 XCR1P46094 333 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 RGS6P49758 472 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 ARSDP51689 593 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 EMX2Q04743 252 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 SPHARQ15513 63 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 GLT8D1Q68CQ7 371 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 TAS1R3Q7RTX0 852 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP38-201ENST00000307017 ZNF679Q8IYX0 411 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 COQ10AQ96MF6 247 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 NTMT1Q9BV86 223 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 TPPP3Q9BW30 176 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 ARPC4-TTLL3A0A0A6YYG9 625 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 GMDSO60547 372 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 PNMTP11086 282 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 CRHBPP24387 322 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 ACRV1P26436 265 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 BDKRB2P30411 391 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 C22orf39Q6P5X5 142 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 PRMT8Q9NR22 394 aaPredicted RBP12.02□□□□□ -0.48
USP38-201ENST00000307017 SCML2Q9UQR0 700 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 ARHGEF28Q8N1W1 1705 aaKnown RBP12.02□□□□□ -0.48
USP38-201ENST00000307017 SH3PXD2BA1X283 911 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 I6L893 689 aaPredicted RBP12.02□□□□□ -0.48
USP38-201ENST00000307017 CREBL2O60519 120 aaPredicted RBP12.02□□□□□ -0.48
USP38-201ENST00000307017 HTR2AP28223 471 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 VHLLQ6RSH7 139 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 C6orf120Q7Z4R8 191 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 SLC5A8Q8N695 610 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 MAPK15Q8TD08 544 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 HIF1ANQ9NWT6 349 aa12.02□□□□□ -0.48
USP38-201ENST00000307017 PRSS51A0A1B0GVH4 220 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 SLC11A1P49279 550 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 FGL1Q08830 312 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 LMAN2Q12907 356 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 ZSWIM9Q86XI8 627 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 FAM86B1Q8N7N1 296 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 OR9A2Q8NGT5 310 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 ZNF681Q96N22 645 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 DNTTIP1Q9H147 329 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 BIN3Q9NQY0 253 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 PPP4R1LQ9P1A2 415 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 PCDHGB1Q9Y5G3 927 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 ERCC1P07992 297 aaPredicted RBP12.02□□□□□ -0.49
USP38-201ENST00000307017 DBHP09172 617 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 STK11Q15831 433 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 VASNQ6EMK4 673 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 BCDIN3DQ7Z5W3 292 aaKnown RBP12.02□□□□□ -0.49
USP38-201ENST00000307017 TTC9BQ8N6N2 239 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 USP32Q8NFA0 1604 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 BORCS7-ASMTA0A0B4J1R7 106 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 A0A0G2JMP0 313 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 H3BMQ9 156 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 JUNDP17535 347 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 CLDN12P56749 244 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 PAGE3Q5JUK9 113 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 DCST2Q5T1A1 773 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 OR4M2Q8NGB6 313 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 OR5H2Q8NGV7 314 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 SLC35F5Q8WV83 523 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 WWTR1Q9GZV5 400 aa12.02□□□□□ -0.49
USP38-201ENST00000307017 CRTAC1Q9NQ79 661 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms