RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ZBTB49Q6ZSB9 765 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PIWIL3Q7Z3Z3 882 aaKnown RBP16.34■□□□□ 0.21
KRT28-201ENST00000306658 WDR53Q7Z5U6 358 aaPredicted RBP16.34■□□□□ 0.21
KRT28-201ENST00000306658 STT3BQ8TCJ2 826 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 SPPL2AQ8TCT8 520 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 CDS1Q92903 461 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 COL21A1Q96P44 957 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 CIB1Q99828 191 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 C9orf16Q9BUW7 83 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 CNPPD1Q9BV87 410 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 RUBCNLQ9H714 662 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PARD6AQ9NPB6 346 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PNO1Q9NRX1 252 aaKnown RBP16.34■□□□□ 0.21
KRT28-201ENST00000306658 CTSFQ9UBX1 484 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 SEC14L3Q9UDX4 400 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PADI2Q9Y2J8 665 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 C15orf41Q9Y2V0 281 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PCDHGA8Q9Y5G5 932 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 GPC6Q9Y625 555 aaPredicted RBP16.34■□□□□ 0.21
KRT28-201ENST00000306658 NUP210LQ5VU65 1888 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 TCRBV16S1A1N1A0A5B0 115 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 C17orf105B2RV13 164 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 TMEM229AB2RXF0 380 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PRSS23O95084 383 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 H6PDO95479 791 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 CHRM4P08173 479 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 ACP2P11117 423 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 NBL1P41271 181 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 FUT5Q11128 374 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 ZNF155Q12901 538 aaPredicted RBP16.34■□□□□ 0.21
KRT28-201ENST00000306658 ARHGAP11BQ3KRB8 267 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 EXOSC6Q5RKV6 272 aaKnown RBP16.34■□□□□ 0.21
KRT28-201ENST00000306658 ZNF385CQ66K41 422 aaPredicted RBP16.34■□□□□ 0.21
KRT28-201ENST00000306658 OVCH1Q7RTY7 1134 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 TMEM151BQ8IW70 566 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PRSS58Q8IYP2 241 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 SMYD1Q8NB12 490 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PLPP5Q8NEB5 264 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 GEMIN6Q8WXD5 167 aaKnown RBP16.34■□□□□ 0.21
KRT28-201ENST00000306658 VN1R1Q9GZP7 353 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 C8orf4Q9NR00 106 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 SLC39A1Q9NY26 324 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 PCDHGA1Q9Y5H4 931 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 CLCA3PQ9Y6N3 262 aa16.34■□□□□ 0.21
KRT28-201ENST00000306658 SAC3D1A6NKF1 404 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 A8MVJ9 347 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 MEN1O00255 615 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 AK1P00568 194 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 ZGLP1P0C6A0 271 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 SSTR4P31391 388 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 MAP3K8P41279 467 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 INSM1Q01101 510 aaPredicted RBP16.33■□□□□ 0.2
KRT28-201ENST00000306658 ELAVL1Q15717 326 aaKnown RBP16.33■□□□□ 0.2
KRT28-201ENST00000306658 MLIPQ5VWP3 458 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 KBTBD2Q8IY47 623 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 COX18Q8N8Q8 333 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 OR7G1Q8NGA0 311 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 GPR151Q8TDV0 419 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 PTPMT1Q8WUK0 201 aaPredicted RBP16.33■□□□□ 0.2
KRT28-201ENST00000306658 PROX1Q92786 737 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 HOXB13Q92826 284 aaPredicted RBP16.33■□□□□ 0.2
KRT28-201ENST00000306658 TSLPQ969D9 159 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 RNF31Q96EP0 1072 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 C7orf34Q96L11 122 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 OR10A5Q9H207 317 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 COQ10BQ9H8M1 238 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 IFT80Q9P2H3 777 aaPredicted RBP16.33■□□□□ 0.2
KRT28-201ENST00000306658 OAZ3Q9UMX2 235 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 SATB2Q9UPW6 733 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 ERVK-19Q9WJR5 959 aa16.33■□□□□ 0.2
KRT28-201ENST00000306658 HEMK1Q9Y5R4 338 aaPredicted RBP16.33■□□□□ 0.2
KRT28-201ENST00000306658 CCDC88CQ9P219 2028 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 TTC36A6NLP5 189 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 hCG_2039718K7EN88 272 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 RECKO95980 971 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 ALBP02768 609 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 KLK3P07288 261 aaPredicted RBP16.32■□□□□ 0.2
KRT28-201ENST00000306658 ZNF23P17027 643 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 ITGA2P17301 1181 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 GABRA3P34903 492 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 EMDP50402 254 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 VLDLRP98155 873 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 DUSP7Q16829 419 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 SFT2D3Q587I9 215 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 LAPTM4BQ86VI4 370 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 PACRGLQ8N7B6 248 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 CHDHQ8NE62 594 aaPredicted RBP16.32■□□□□ 0.2
KRT28-201ENST00000306658 DAZLQ92904 295 aaKnown RBP16.32■□□□□ 0.2
KRT28-201ENST00000306658 LRFN5Q96NI6 719 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 LMF2Q9BU23 707 aaKnown RBP16.32■□□□□ 0.2
KRT28-201ENST00000306658 SLC38A1Q9H2H9 487 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 TRIM45Q9H8W5 580 aaPredicted RBP16.32■□□□□ 0.2
KRT28-201ENST00000306658 NTN4Q9HB63 628 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 FOLH1BQ9HBA9 442 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 PRODH2Q9UF12 536 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 SH3GLB1Q9Y371 365 aa16.32■□□□□ 0.2
KRT28-201ENST00000306658 H0YJX3 145 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 HRKO00198 91 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 GDF9O60383 454 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 NKX2-2O95096 273 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms