RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 HIST1H2ADP20671 130 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 RAD52P43351 418 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 AIF1P55008 147 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 PRR5P85299 388 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 SNTB2Q13425 540 aaKnown RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 TDGQ13569 410 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 GSG1Q2KHT4 349 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 PLK5Q496M5 336 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 LRRC73Q5JTD7 316 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 HIST2H2AA3Q6FI13 130 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 RRM2BQ7LG56 351 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 LNX2Q8N448 690 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 TRPV1Q8NER1 839 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 MRPS24Q96EL2 167 aaKnown RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 HIST1H2AHQ96KK5 128 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 OR1F2PQ96R84 312 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 SECISBP2Q96T21 854 aaKnown RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 HIST1H2AJQ99878 128 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 NKX6-2Q9C056 277 aaPredicted RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 KCNK12Q9HB15 430 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 CTSFQ9UBX1 484 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 DISC1C4P0D8 188 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 G3V3Q6 166 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 FGF10O15520 208 aaPredicted RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 SEMA7AO75326 666 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 ADRB1P08588 477 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 SNRPBP14678 240 aaKnown RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 EPORP19235 508 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 NPR2P20594 1047 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 WARSP23381 471 aaKnown RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 ACSL1P33121 698 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 AKR1C3P42330 323 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 RPIAP49247 311 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 HBA1P69905 142 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 SLC3A1Q07837 685 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 ACSM2AQ08AH3 577 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 PLD1Q13393 1074 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 SLC25A35Q3KQZ1 300 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 ARHGAP15Q53QZ3 475 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 CPTPQ5TA50 214 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 ACSM2BQ68CK6 577 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 NOTUMQ6P988 496 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 ARL9Q6T311 187 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 FIP1L1Q6UN15 594 aaKnown RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 ZNF704Q6ZNC4 412 aaPredicted RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 HDDC3Q8N4P3 179 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 MEIOBQ8N635 442 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 C1orf52Q8N6N3 182 aaKnown RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 OR4C15Q8NGM1 316 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 MED8Q96G25 268 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 SMARCD1Q96GM5 515 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 ZC3HAV1LQ96H79 300 aaKnown RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 TSNAXQ99598 290 aaKnown RBP13.62□□□□□ -0.23
CDT1-201ENST00000301019 TM6SF2Q9BZW4 377 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 GPATCH2Q9NW75 528 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 PCDHB11Q9Y5F2 797 aa13.62□□□□□ -0.23
CDT1-201ENST00000301019 HHLA1C9JL84 531 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 FMO6PO60774 539 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 RAB36O95755 333 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 ADCYAP1R1P41586 468 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 PCBP2Q15366 365 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDT1-201ENST00000301019 TTLL9Q3SXZ7 439 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 TMEM255AQ5JRV8 349 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 PLPPR4Q7Z2D5 763 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 ZNF614Q8N883 585 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 OR13C5Q8NGS8 318 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 KCNJ9Q92806 393 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 FCRL4Q96PJ5 515 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 SLC35A5Q9BS91 424 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 PITHD1Q9GZP4 211 aaPredicted RBP13.61□□□□□ -0.23
CDT1-201ENST00000301019 ISG20L2Q9H9L3 353 aaKnown RBP13.61□□□□□ -0.23
CDT1-201ENST00000301019 COA4Q9NYJ1 87 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 SCP2D1Q9UJQ7 156 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 MGAT4DA6NG13 374 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 MANSC4A6NHS7 340 aaPredicted RBP13.61□□□□□ -0.23
CDT1-201ENST00000301019 SOD1P00441 154 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 AHCYP23526 432 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 CTSOP43234 321 aaPredicted RBP13.61□□□□□ -0.23
CDT1-201ENST00000301019 CHIT1Q13231 466 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 SMAD2Q15796 467 aaKnown RBP13.61□□□□□ -0.23
CDT1-201ENST00000301019 GUCA2BQ16661 112 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 FAM110CQ1W6H9 321 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 SYT14P1Q58G82 188 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 ZER1Q7Z7L7 766 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 ZYG11BQ9C0D3 744 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 OSGEPL1Q9H4B0 414 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 ASB8Q9H765 288 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 C5AR2Q9P296 337 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 CHST2Q9Y4C5 530 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 MKI67P46013 3256 aaKnown RBP13.61□□□□□ -0.23
CDT1-201ENST00000301019 TRPM7Q96QT4 1865 aa13.61□□□□□ -0.23
CDT1-201ENST00000301019 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 MAGEB4O15481 346 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 PRAMEF4O60810 478 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 NME6O75414 186 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 C1SP09871 688 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 EBLN1P0CF75 366 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 LPOP22079 712 aaPredicted RBP13.6□□□□□ -0.23
CDT1-201ENST00000301019 ACVR1BP36896 505 aa13.6□□□□□ -0.23
CDT1-201ENST00000301019 TTPAP49638 278 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms