RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 DEDD2Q8WXF8 326 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 CHFRQ96EP1 664 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 FAM83CQ9BQN1 747 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 SMG9Q9H0W8 520 aaKnown RBP5.31□□□□□ -1.56
CPSF2-201ENST00000298875 MEAF6Q9HAF1 191 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 FBXL12Q9NXK8 326 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 FNIP2Q9P278 1114 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 ACSL6Q9UKU0 697 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 F5H5P2 479 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 CSF1P09603 554 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 MMP12P39900 470 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 ALDH3B1P43353 468 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 PTH2RP49190 550 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 NTRK2Q16620 822 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 C14orf28Q4W4Y0 310 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 TMEM225Q6GV28 225 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 FBXL22Q6P050 247 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 TMIGD1Q6UXZ0 262 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 FTMTQ8N4E7 242 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 OR7G3Q8NG95 312 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 OR4K1Q8NGD4 311 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 THAP3Q8WTV1 239 aaPredicted RBP5.31□□□□□ -1.56
CPSF2-201ENST00000298875 MMABQ96EY8 250 aaPredicted RBP5.31□□□□□ -1.56
CPSF2-201ENST00000298875 BORCS6Q96GS4 357 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 RBP7Q96R05 134 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 GPR83Q9NYM4 423 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 CICQ96RK0 1608 aaPredicted RBP5.31□□□□□ -1.56
CPSF2-201ENST00000298875 EEDO75530 441 aaKnown RBP5.31□□□□□ -1.56
CPSF2-201ENST00000298875 SYNGR4O95473 234 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 RAC2P15153 192 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 RAB3AP20336 220 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 MS4A13Q5J8X5 152 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 SFRP4Q6FHJ7 346 aaPredicted RBP5.31□□□□□ -1.56
CPSF2-201ENST00000298875 ENPP6Q6UWR7 440 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 CNN2Q99439 309 aaKnown RBP5.31□□□□□ -1.56
CPSF2-201ENST00000298875 NSUN3Q9H649 340 aaKnown RBP5.31□□□□□ -1.56
CPSF2-201ENST00000298875 BCAS3Q9H6U6 928 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF442Q9H7R0 627 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 SLC22A11Q9NSA0 550 aa5.31□□□□□ -1.56
CPSF2-201ENST00000298875 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.31□□□□□ -1.56
CPSF2-201ENST00000298875 FUOMA2VDF0 154 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF254O75437 659 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 POP7O75817 140 aaKnown RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 LCKP06239 509 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 NFATC4Q14934 902 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 MLC1Q15049 377 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SSX7Q7RTT5 188 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ZFAND4Q86XD8 727 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 NRROSQ86YC3 692 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OR9A1PQ8NGU1 263 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 PRTFDC1Q9NRG1 225 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OARD1Q9Y530 152 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 STSP08842 583 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF30P17039 623 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 HOXB9P17482 250 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 CD9P21926 228 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 STC1P52823 247 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TXNRD3NBQ6F5E7 133 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 LRFN4Q6PJG9 635 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TMEM205Q6UW68 189 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF516Q92618 1163 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 FBXL18Q96ME1 805 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OR1F2PQ96R84 312 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 C11orf84Q9BUA3 381 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TEX10Q9NXF1 929 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 RP1L1Q8IWN7 2480 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 MYH13Q9UKX3 1938 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 IGLV3-22A0A075B6J6 115 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 P2RX6O15547 441 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 CDK1P06493 297 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 OXTRP30559 389 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 S100A7P31151 101 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 DNAJB13P59910 316 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KCNC3Q14003 757 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KCTD18Q6PI47 426 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 C19orf35Q6ZS72 473 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 CELF5Q8N6W0 485 aaKnown RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ZFP41Q8N8Y5 198 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 FAM46BQ96A09 425 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SGTBQ96EQ0 304 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TUBG2Q9NRH3 451 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KCNIP2Q9NS61 270 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 MYEF2Q9P2K5 600 aaKnown RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 EBLN1P0CF75 366 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 MEF2DQ14814 521 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 METAP1DQ6UB28 335 aaPredicted RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 HIST2H3AQ71DI3 136 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 DPPA2Q7Z7J5 298 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 AVL9Q8NBF6 648 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 LFNGQ8NES3 379 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SLC35B2Q8TB61 432 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TRMT10AQ8TBZ6 339 aaKnown RBP5.3□□□□□ -1.56
CPSF2-201ENST00000298875 TMEM234Q8WY98 164 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 RAB39BQ96DA2 213 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF382Q96SR6 550 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 BTBD2Q9BX70 525 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 SLC38A1Q9H2H9 487 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 KCNIP1Q9NZI2 227 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 DLGAP4Q9Y2H0 992 aa5.3□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF860A6NHJ4 632 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms